RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SCAMP3O14828 347 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 NFATC1O95644 943 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 CHRNB1P11230 501 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 CHRNB2P17787 502 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 NRLP54845 237 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 POLR2FP61218 127 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 YWHAEP62258 255 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 SLC7A9P82251 487 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 ZXDBP98169 803 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 GOLGA8FQ08AF8 430 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 GOLGA8DPQ0D2H9 430 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 FZD5Q13467 585 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 ZNF77Q15935 545 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 GOLGA7BQ2TAP0 167 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 DENND1BQ6P3S1 775 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 Q6ZS52 159 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 NOP9Q86U38 636 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 DDX42Q86XP3 938 aaKnown RBP eCLIP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 MAML2Q8IZL2 1156 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 SPEM1Q8N4L4 309 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 UBA3Q8TBC4 463 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 SLC20A1Q8WUM9 679 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 NDRG1Q92597 394 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 P2RY13Q9BPV8 354 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 SYT11Q9BT88 431 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 RNF38Q9H0F5 515 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 LINC00597Q9H2U6 94 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 ECT2Q9H8V3 914 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 NLRC4Q9NPP4 1024 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 HPS4Q9NQG7 708 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 TLR8Q9NR97 1041 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 COMMD8Q9NX08 183 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 OSER1Q9NX31 292 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 ZSCAN32Q9NX65 697 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 GMIPQ9P107 970 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 CFAP97Q9P2B7 532 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 TSPAN16Q9UKR8 245 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 SH3BP1Q9Y3L3 701 aa9.21□□□□□ -0.94
PDLIM5-213ENST00000509357 OTOL1A6NHN0 477 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 SLC9A3R1O14745 358 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 COCHO43405 550 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 ATG13O75143 517 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 IRF1P10914 325 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 CD19P15391 556 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 DRD1P21728 446 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 GJA4P35212 333 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 GALK1P51570 392 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 SATB1Q01826 763 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 PDE4CQ08493 712 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 USP4Q13107 963 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 RAPGEF1Q13905 1077 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 EML3Q32P44 896 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 ZNF687Q8N1G0 1237 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 SYNPOQ8N3V7 929 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 CLEC4CQ8WTT0 213 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 PIWIL1Q96J94 861 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 FAM126AQ9BYI3 521 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 CCSER2Q9H7U1 834 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 IL37Q9NZH6 218 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 NOCTQ9UK39 431 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 PCDHGA2Q9Y5H1 932 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 MYO15AQ9UKN7 3530 aa9.2□□□□□ -0.94
PDLIM5-213ENST00000509357 A0A1W2PQC6 194 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 FAM92AA1XBS5 289 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 PIK3R2O00459 728 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 TRDMT1O14717 391 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 TLR5O60602 858 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 GFPT2O94808 682 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 CAVIN2O95810 425 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 OAS1P00973 400 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 EGFP01133 1207 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 GYPCP04921 128 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 PAEPP09466 180 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 VDRP11473 427 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 KRT5P13647 590 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 UBASH3AP57075 661 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 HEATR6Q6AI08 1181 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 PMF1Q6P1K2 205 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 SARM1Q6SZW1 724 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 LCLAT1Q6UWP7 414 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 IRF2BP2Q7Z5L9 587 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 TADA2BQ86TJ2 420 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 PIGZQ86VD9 579 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 DNAAF5Q86Y56 855 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 EPS8L1Q8TE68 723 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 SLC35F5Q8WV83 523 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 ZNF606Q8WXB4 792 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 CD101Q93033 1021 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 SECISBP2LQ93073 1101 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 WBP2Q969T9 261 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 CHFRQ96EP1 664 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 PCDHB18PQ96TA0 734 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 DUSP16Q9BY84 665 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 STK33Q9BYT3 514 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 NMUR1Q9HB89 426 aa9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 PRMT8Q9NR22 394 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-213ENST00000509357 TBC1D14Q9P2M4 693 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms