RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 USP33Q8TEY7 942 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 TFAP2BQ92481 460 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 CIZ1Q9ULV3 898 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 CEP192Q8TEP8 1941 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 THADAQ6YHU6 1953 aa17.64■□□□□ 0.41
PDLIM7-215ENST00000506161 CFAP47Q6ZTR5 3102 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 PSMA7O14818 248 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 ADH5P11766 374 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 RARGP13631 454 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 HOXA6P31267 233 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 NRLP54845 237 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 CAMK4Q16566 473 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 GOLGA7BQ2TAP0 167 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 C2orf27AQ580R0 203 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 RAB41Q5JT25 222 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 ETFBKMTQ8IXQ9 262 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 CCDC33Q8N5R6 958 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 CCDC150Q8NCX0 1101 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 FBXO44Q9H4M3 255 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 PNPLA8Q9NP80 782 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 TLR8Q9NR97 1041 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 GMEB2Q9UKD1 530 aa17.63■□□□□ 0.41
PDLIM7-215ENST00000506161 PLXND1Q9Y4D7 1925 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 STX10O60499 249 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 KLKB1P03952 638 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 PDE4CQ08493 712 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 NR1H3Q13133 447 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 SIM2Q14190 667 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 DMC1Q14565 340 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 PPM1JQ5JR12 505 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 TMEM92Q6UXU6 159 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 CCDC186Q7Z3E2 898 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 FAM160A2Q8N612 972 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 FAXDC2Q96IV6 333 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 CEP63Q96MT8 703 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 TSPAN16Q9UKR8 245 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 SH3BP1Q9Y3L3 701 aa17.62■□□□□ 0.41
PDLIM7-215ENST00000506161 DCLK1O15075 740 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 KIR2DL1P43626 348 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 SPEM2Q0P670 501 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 PPP2R5DQ14738 602 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 CCDC40Q4G0X9 1142 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 PKDCCQ504Y2 493 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 Q6ZNB5 142 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 HTR3DQ70Z44 454 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 SYT13Q7L8C5 426 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 KBTBD6Q86V97 674 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 DDX42Q86XP3 938 aaKnown RBP eCLIP17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 TRIM59Q8IWR1 403 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 KIAA1958Q8N8K9 716 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 UBA3Q8TBC4 463 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 SPHK2Q9NRA0 654 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 CHD6Q8TD26 2715 aa17.61■□□□□ 0.41
PDLIM7-215ENST00000506161 O00370 1275 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 SLC9A3R1O14745 358 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 STC2O76061 302 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 KAT7O95251 611 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 ATP5C1P36542 298 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 AMPD2Q01433 879 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 APBA1Q02410 837 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 CCDC6Q16204 474 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 FBXO43Q4G163 708 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 RRAGAQ7L523 313 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 MIB1Q86YT6 1006 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 ALLCQ8N6M5 410 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 ANKRD52Q8NB46 1076 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 NETO1Q8TDF5 533 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 KREMEN1Q96MU8 473 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 SRRTQ9BXP5 876 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 ULBP1Q9BZM6 244 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 TBC1D14Q9P2M4 693 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 HOOK1Q9UJC3 728 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 SLC8A2Q9UPR5 921 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 INVSQ9Y283 1065 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 USP24Q9UPU5 2620 aa17.6■□□□□ 0.41
PDLIM7-215ENST00000506161 SGK1O00141 431 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 HOXC11O43248 304 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 ADAM23O75077 832 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 TULP3O75386 442 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 BRD2P25440 801 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 TIE1P35590 1138 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 TKTL1P51854 596 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 KCNH2Q12809 1159 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 PAK1Q13153 545 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 STIM1Q13586 685 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 C10orf120Q5SQS8 335 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 LAIR1Q6GTX8 287 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 TPGS1Q6ZTW0 290 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 TOGARAM2Q6ZUX3 1019 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 IRF2BP1Q8IU81 584 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 IL17RCQ8NAC3 791 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 GAB3Q8WWW8 586 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 PNKPQ96T60 521 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 TPSD1Q9BZJ3 242 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 NACA2Q9H009 215 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 METTL14Q9HCE5 456 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms