RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 FNDC3AQ9Y2H6 1198 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 RAD54BQ9Y620 910 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 ASCC3Q8N3C0 2202 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 PTPRBP23467 1997 aa3.92□□□□□ -1.78
USP46-205ENST00000504078 SETXQ7Z333 2677 aaKnown RBP3.92□□□□□ -1.78
USP46-205ENST00000504078 DENND4CQ5VZ89 1909 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 DSPP15924 2871 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 NPHP3-ACAD11A0A0J9YXS1 232 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 HMX2A2RU54 273 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 OR6C75A6NL08 312 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 MEI4A8MW99 385 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 LACTBL1A8MY62 500 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 TISP43B9A030 160 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 K7ERI5 159 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CBX4O00257 560 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PLK4O00444 970 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 TRIM24O15164 1050 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 JAK2O60674 1132 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PRPF40AO75400 957 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 CDC45O75419 566 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SASH3O75995 380 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 LYPLA2O95372 231 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 ATXN1LP0C7T5 689 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 IRF1P10914 325 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 ODC1P11926 461 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CYP11B2P19099 503 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CCT6AP40227 531 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 NPTX2P47972 431 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SLC6A11P48066 632 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 MLLT6P55198 1093 aaPredicted RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 PSMC1P62191 440 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 PPP2R3AQ06190 1150 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 GFPT1Q06210 699 aaPredicted RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 POU5F1BQ06416 359 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SCRN1Q12765 414 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 RESTQ13127 1097 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 MAPK7Q13164 816 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 GPR17Q13304 367 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PPP2R5AQ15172 486 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PDGFRLQ15198 375 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PTPAQ15257 358 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CACNA1EQ15878 2313 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CRY1Q16526 586 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 DDR2Q16832 855 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PLEKHG6Q3KR16 790 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 XKR4Q5GH76 650 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 WSCD1Q658N2 575 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 JADE1Q6IE81 842 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 ARMCX5Q6P1M9 558 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 DHRS13Q6UX07 377 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 KIAA1324Q6UXG2 1013 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 ALKAL1Q6UXT8 129 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CCNI2Q6ZMN8 369 aaPredicted RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 RTL10Q7L3V2 364 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 KCNK18Q7Z418 384 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 FILIP1Q7Z7B0 1213 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 ITIH5Q86UX2 942 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 LRRTM3Q86VH5 581 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 MIB1Q86YT6 1006 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 LURAP1LQ8IV03 231 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SCN4BQ8IWT1 228 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SLFN12Q8IYM2 578 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 DAW1Q8N136 415 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 ZNF843Q8N446 348 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 NAT16Q8N8M0 369 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 NECAB1Q8N987 351 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 TRIML1Q8N9V2 468 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 IL17RCQ8NAC3 791 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SETD7Q8WTS6 366 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 OSCP1Q8WVF1 389 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 ADAMTS14Q8WXS8 1223 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SNX19Q92543 992 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 MRPS31Q92665 395 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 ATP2A3Q93084 1043 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 NAF1Q96HR8 494 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 SENP8Q96LD8 212 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 DRC1Q96MC2 740 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 FCRL3Q96P31 734 aaPredicted RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 PLIN2Q99541 437 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 HSD17B14Q9BPX1 270 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PYM1Q9BRP8 204 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 ZMYND15Q9H091 742 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 MIR1-1HGQ9H1L0 117 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 IKZF4Q9H2S9 585 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 LINC00597Q9H2U6 94 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 KIF9Q9HAQ2 790 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CAPN10Q9HC96 672 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 KMT5AQ9NQR1 393 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 DDX19AQ9NUU7 478 aaKnown RBP3.91□□□□□ -1.78
USP46-205ENST00000504078 TDP1Q9NUW8 608 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 CACNA2D2Q9NY47 1150 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 OBP2AQ9NY56 170 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 EBF1Q9UH73 591 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PILRBQ9UKJ0 227 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 TPCN1Q9ULQ1 816 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 TBX20Q9UMR3 447 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 PCDHA12Q9UN75 941 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.91□□□□□ -1.78
USP46-205ENST00000504078 RAI2Q9Y5P3 530 aa3.91□□□□□ -1.78
USP46-205ENST00000504078 SLCO1B1Q9Y6L6 691 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms