RNA–Protein interactions for RNA: ENST00000496528.5

TMCO4-208, Transcript of transmembrane and coiled-coil domains 4, human

TSL 5

Gene TMCO4, Length 804 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMCO4-208	ENST00000496528	PIR	O00625	290 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	CYB561D2	O14569	222 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	TSPAN3	O60637	253 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	CS	O75390	466 aa	Known RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	BAG4	O95429	457 aa	Known RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	EPHA8	P29322	1005 aa	Predicted RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	CASR	P41180	1078 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	NUCB1	Q02818	461 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	BNIP3	Q12983	259 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	STARD3	Q14849	445 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	NECTIN1	Q15223	517 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	NFE2	Q16621	373 aa	Predicted RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	PROX2	Q3B8N5	592 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	SFMBT2	Q5VUG0	894 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	C9orf57	Q5W0N0	161 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	SMC5	Q8IY18	1101 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	SPATA20	Q8TB22	786 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	OTUB2	Q96DC9	234 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	DEPDC7	Q96QD5	511 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	ACE2	Q9BYF1	805 aa	Predicted RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	TMEM134	Q9H6X4	195 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	ABCB6	Q9NP58	842 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	SPHK2	Q9NRA0	654 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	DNAJC17	Q9NVM6	304 aa	Known RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	PCDHA12	Q9UN75	941 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	NAV3	Q8IVL0	2385 aa		13.97	□□□□□ -0.17
TMCO4-208	ENST00000496528	ZNF840P	A6NDX5	716 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	LACTBL1	A8MY62	500 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	ACADM	P11310	421 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	RBMS1	P29558	406 aa	Known RBP	13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	COPA	P53621	1224 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	TBR1	Q16650	682 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	SPATA1	Q5VX52	437 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	SRRM1	Q8IYB3	904 aa	Known RBP	13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	LEO1	Q8WVC0	666 aa	Predicted RBP	13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	PRR11	Q96HE9	360 aa	Predicted RBP	13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	LSG1	Q9H089	658 aa	Known RBP	13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	TRPM5	Q9NZQ8	1165 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	SATB2	Q9UPW6	733 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	PLAA	Q9Y263	795 aa		13.96	□□□□□ -0.17
TMCO4-208	ENST00000496528	ZFC3H1	O60293	1989 aa	Known RBP	13.96	□□□□□ -0.18
TMCO4-208	ENST00000496528	CKAP5	Q14008	2032 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	PDZD2	O15018	2839 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	CDRT15L2	A8MXV6	281 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	YKT6	O15498	198 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	XPOT	O43592	962 aa	Known RBP	13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	GJB6	O95452	261 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	WNT1	P04628	370 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	GRN	P28799	593 aa	Known RBP	13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	KIF26B	Q2KJY2	2108 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	CATSPER3	Q86XQ3	398 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	CACUL1	Q86Y37	369 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	PYM1	Q9BRP8	204 aa	Known RBP	13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	TMPRSS4	Q9NRS4	437 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	LRWD1	Q9UFC0	647 aa		13.95	□□□□□ -0.18
TMCO4-208	ENST00000496528	MTOR	P42345	2549 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	CCDC169	A6NNP5	214 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	OPA1	O60313	960 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	FSBP	O95073	299 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	OAS1	P00973	400 aa	Known RBP	13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	CLTA	P09496	248 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	ATXN8OS	P0DMR3	200 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	IFNAR1	P17181	557 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	DUSP3	P51452	185 aa	Predicted RBP	13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	ZNF132	P52740	706 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	USP46	P62068	366 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	RACK1	P63244	317 aa	Known RBP	13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	TSPY1	Q01534	308 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	ENPP2	Q13822	863 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	PDIA5	Q14554	519 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	CLCA4	Q14CN2	919 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	C3orf38	Q5JPI3	329 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	SCN4B	Q8IWT1	228 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	BBS7	Q8IWZ6	715 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	KIFAP3	Q92845	792 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	TRIM9	Q9C026	710 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	HAPLN2	Q9GZV7	340 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528	HIVEP1	P15822	2718 aa		13.94	□□□□□ -0.18
TMCO4-208	ENST00000496528		A0A1B0GTL3	188 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	ARHGEF35	A5YM69	484 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	CACNG3	O60359	315 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	TOM1L1	O75674	476 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	CISD3	P0C7P0	127 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	COL8A1	P27658	744 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	DCT	P40126	519 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	NPTX2	P47972	431 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	PEX3	P56589	373 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	PPP2R3A	Q06190	1150 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	SRSF6	Q13247	344 aa	Known RBP	13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	CCDC142	Q17RM4	750 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	GALNT17	Q6IS24	598 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	NSUN7	Q8NE18	718 aa	Known RBP	13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	SLC6A18	Q96N87	628 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	PKMYT1	Q99640	499 aa		13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.93	□□□□□ -0.18
TMCO4-208	ENST00000496528	ARHGAP28	Q9P2N2	729 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms