RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PCGF5Q86SE9 256 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 SAPCD2Q86UD0 394 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 GPR180Q86V85 440 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 PSD2Q9BQI7 771 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 NUP85Q9BW27 656 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 SLC17A7Q9P2U7 560 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 PTBP2Q9UKA9 531 aaKnown RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.91
HPS4-217ENST00000496385 SLC30A1Q9Y6M5 507 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 ZNF536O15090 1300 aa9.4□□□□□ -0.91
HPS4-217ENST00000496385 SDR42E2A6NKP2 422 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 TRIM64CA6NLI5 447 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 PRR5-ARHGAP8B1AHC4 643 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 USP2O75604 605 aaPredicted RBP9.39□□□□□ -0.91
HPS4-217ENST00000496385 PCYT1AP49585 367 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 HUNKP57058 714 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 ARHGAP8P85298 464 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 ECM1Q16610 540 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 PHKG1Q16816 387 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 ZBED5Q49AG3 693 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 KCTD21Q4G0X4 260 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 FAM47AQ5JRC9 791 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 CRLF3Q8IUI8 442 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
HPS4-217ENST00000496385 CMTM5Q96DZ9 223 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 THAP11Q96EK4 314 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 NDEL1Q9GZM8 345 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 TRNAU1APQ9NX07 287 aaKnown RBP9.39□□□□□ -0.91
HPS4-217ENST00000496385 APPL1Q9UKG1 709 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 NAV1Q8NEY1 1877 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 TMEM88BA6NKF7 163 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 EIF3DO15371 548 aaKnown RBP eCLIP9.39□□□□□ -0.91
HPS4-217ENST00000496385 GDF11O95390 407 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 ZBTB11O95625 1053 aaPredicted RBP9.39□□□□□ -0.91
HPS4-217ENST00000496385 BGNP21810 368 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 APLP1P51693 650 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 HNRNPFP52597 415 aaKnown RBP9.39□□□□□ -0.91
HPS4-217ENST00000496385 CYP4A11Q02928 519 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 SUPT20HL1Q3ZLR7 823 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 FKBP1CQ5VVH2 108 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 DOK1Q99704 481 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 IMPG2Q9BZV3 1241 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.915e-8■■■■■ 32.9
HPS4-217ENST00000496385 SEPT3Q9UH03 358 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 KLHL3Q9UH77 587 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 MYRFQ9Y2G1 1151 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 ASTN1O14525 1302 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 ATRNL1Q5VV63 1379 aa9.39□□□□□ -0.91
HPS4-217ENST00000496385 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 TRIM64BA6NI03 449 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 FOXN3O00409 490 aaPredicted RBP9.38□□□□□ -0.91
HPS4-217ENST00000496385 AQP9O43315 295 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 SLC37A4O43826 429 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 EEF2P13639 858 aaKnown RBP9.38□□□□□ -0.91
HPS4-217ENST00000496385 CIITAP33076 1130 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 HOXD13P35453 343 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 SLC5A3P53794 718 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 SLC12A3P55017 1021 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 STX3Q13277 289 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 OASLQ15646 514 aaKnown RBP9.38□□□□□ -0.91
HPS4-217ENST00000496385 SLC35G1Q2M3R5 365 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 HSF5Q4G112 596 aaPredicted RBP9.38□□□□□ -0.91
HPS4-217ENST00000496385 GPR141Q7Z602 305 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 AMIGO2Q86SJ2 522 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 C2orf69Q8N8R5 385 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ATG4AQ8WYN0 398 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 DLG3Q92796 817 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 PAFAH2Q99487 392 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 PCDHA12Q9UN75 941 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 SLC8A2Q9UPR5 921 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ERVK-11Q9UQG0 969 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ERGIC3Q9Y282 383 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 DRG1Q9Y295 367 aaKnown RBP9.38□□□□□ -0.91
HPS4-217ENST00000496385 IFT52Q9Y366 437 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 TRPM7Q96QT4 1865 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 H3BNH8 94 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 FBXO21O94952 628 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ALOX5P09917 674 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ATP6V0D1P61421 351 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 JAG1P78504 1218 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 NANOGP8Q6NSW7 305 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
HPS4-217ENST00000496385 CHERPQ8IWX8 916 aaKnown RBP9.38□□□□□ -0.91
HPS4-217ENST00000496385 POU5F2Q8N7G0 328 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 DCAKDQ8WVC6 231 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 SLC5A5Q92911 643 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ZNF341Q9BYN7 854 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 ELP3Q9H9T3 547 aa9.38□□□□□ -0.91
HPS4-217ENST00000496385 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms