RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1-204ENST00000489862 SRP68Q9UHB9 627 aaKnown RBP3.61□□□□□ -1.83
DEPDC1-204ENST00000489862 GRIN2BQ13224 1484 aa3.61□□□□□ -1.83
DEPDC1-204ENST00000489862 ANKRD18BA2A2Z9 1011 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 PGPEP1LA6NFU8 196 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 HOXC11O43248 304 aaPredicted RBP3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 DDX58O95786 925 aaKnown RBP3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 FTLP02792 175 aaPredicted RBP3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 PARP1P09874 1014 aaKnown RBP3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 NPR1P16066 1061 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 GATA3P23771 443 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 KRT9P35527 623 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 NPTX2P47972 431 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 CDC42EP1Q00587 391 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 PPP2R5CQ13362 524 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 DAG1Q14118 895 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 ATP2B3Q16720 1220 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 FLYWCH1Q4VC44 716 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 ARHGAP15Q53QZ3 475 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 C3orf38Q5JPI3 329 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 SULT6B1Q6IMI4 303 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 PLBD1Q6P4A8 553 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 MIGA2Q7L4E1 593 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 HERC6Q8IVU3 1022 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 GALNT15Q8N3T1 639 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 NSUN7Q8NE18 718 aaKnown RBP3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 IPO4Q8TEX9 1081 aaKnown RBP3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 ZNF384Q8TF68 577 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 BRI3BPQ8WY22 251 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 SSH1Q8WYL5 1049 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 HDAC10Q969S8 669 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 TMEM125Q96AQ2 219 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 HEPHQ9BQS7 1158 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 FAM167BQ9BTA0 163 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 LMAN2LQ9H0V9 348 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 UNC45AQ9H3U1 944 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 MLXIPQ9HAP2 919 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 IL17RBQ9NRM6 502 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 TBC1D29Q9UFV1 150 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 SLC39A10Q9ULF5 831 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 SLC45A2Q9UMX9 530 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 CDYLQ9Y232 598 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 TMEM98Q9Y2Y6 226 aa3.6□□□□□ -1.83
DEPDC1-204ENST00000489862 LRRC3CA6NJW4 275 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 PEX1O43933 1283 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 C1QL1O75973 258 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 IL18RAPO95256 599 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 NDST3O95803 873 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 CALRP27797 417 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 CACNA2D1P54289 1103 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 SPARCL1Q14515 664 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 PLS1Q14651 629 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 CD300EQ496F6 205 aaPredicted RBP3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 PABPC1LQ4VXU2 614 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 DNAJC21Q5F1R6 531 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 SLC9C2Q5TAH2 1124 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 NUGGCQ68CJ6 796 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 C4orf50Q6ZRC1 276 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 CCDC129Q6ZRS4 1044 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 IL17RDQ8NFM7 739 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 MUL1Q969V5 352 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 KLHL32Q96NJ5 620 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 SDF4Q9BRK5 362 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 CNPPD1Q9BV87 410 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 KATNAL1Q9BW62 490 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 STK33Q9BYT3 514 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 VPS33BQ9H267 617 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 KLK15Q9H2R5 256 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 GHITMQ9H3K2 345 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 PLSCR4Q9NRQ2 329 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 SEMA4GQ9NTN9 838 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 NKIRAS2Q9NYR9 191 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 COL20A1Q9P218 1284 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 CTTNBP2NLQ9P2B4 639 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 FEM1BQ9UK73 627 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 PADI4Q9UM07 663 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 CHD1O14646 1710 aa3.59□□□□□ -1.83
DEPDC1-204ENST00000489862 SYNJ2O15056 1496 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 MAGI1Q96QZ7 1491 aaPredicted RBP3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 A0A1W2PS29 197 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 YY2O15391 372 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 THP07101 528 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 ADRB2P07550 413 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 GYS1P13807 737 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 KCNA2P16389 499 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 FGFR2P21802 821 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 FOLR3P41439 243 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 SLC16A1P53985 500 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 PRKAA2P54646 552 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 DRG2P55039 364 aaKnown RBP3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 SUMO3P55854 103 aaPredicted RBP3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 NKX6-1P78426 367 aaPredicted RBP3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 FPGSQ05932 587 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 CNGA2Q16280 664 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 KRTAP27-1Q3LI81 207 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 FBXO47Q5MNV8 452 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 TMCO3Q6UWJ1 677 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 SH2D3CQ8N5H7 860 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 KCNG4Q8TDN1 519 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms