RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 GDAP2Q9NXN4 497 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 PRKAG2Q9UGJ0 569 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 LGALS13Q9UHV8 139 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 TTC3P53804 2025 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 MICAL3Q7RTP6 2002 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 PTPRSQ13332 1948 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 LRRD1A4D1F6 860 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CFAP69A5D8W1 941 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 GMNCA6NCL1 334 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 C3orf70A6NLC5 250 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 F8VP50 259 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 APOC4-APOC2K7ER74 178 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 M0QYV0 167 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 SOX1O00570 391 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 DNALI1O14645 258 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 MEFVO15553 781 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CDH16O75309 829 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 ENDOD1O94919 500 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CALCAP01258 141 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 APOC2P02655 101 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CXCL10P02778 98 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CKBP12277 381 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 RAG1P15918 1043 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 ACADSBP45954 432 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 KCNJ1P48048 391 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 RPL34P49207 117 aaKnown RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 NDST1P52848 882 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CRYBB1P53674 252 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 ITGA8P53708 1063 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 SLC18A1P54219 525 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 MAGOHP61326 146 aaKnown RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 OGDHQ02218 1023 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 MGAT3Q09327 533 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 BFSP2Q13515 415 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 MBTPS1Q14703 1052 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 PKDCCQ504Y2 493 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF394Q53GI3 561 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 BOLA3Q53S33 107 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 MFSD7Q6UXD7 560 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 SCARA5Q6ZMJ2 495 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 GSTA5Q7RTV2 222 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 LIMS2Q7Z4I7 341 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 TMEM110Q86TL2 294 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 TDRPQ86YL5 185 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CPNE8Q86YQ8 564 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 TMEM192Q8IY95 271 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 HACE1Q8IYU2 909 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CRYBG2Q8N1P7 616 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 PHTF2Q8N3S3 785 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 SH2D3CQ8N5H7 860 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 HPS1Q92902 700 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 ELMO3Q96BJ8 720 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CPXM1Q96SM3 734 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 LBHD1Q9BQE6 289 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 SDCBP2Q9H190 292 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CDC42EP4Q9H3Q1 356 aaKnown RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 CENPHQ9H3R5 247 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 SMYD3Q9H7B4 428 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 UBN1Q9NPG3 1134 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 SENP1Q9P0U3 644 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 HESX1Q9UBX0 185 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 TPX2Q9ULW0 747 aaKnown RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 POLIQ9UNA4 740 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 NOVA2Q9UNW9 492 aaKnown RBP8.84□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF148Q9UQR1 794 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 USTQ9Y2C2 406 aa8.84□□□□□ -0.99
VTI1A-207ENST00000489357 A0A087WUV0 522 aaPredicted RBP8.83□□□□□ -1
VTI1A-207ENST00000489357 C2CD4BA6NLJ0 364 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 MDM4O15151 490 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 CHRNA1P02708 482 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 CSF2RAP15509 400 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 SELPP16109 830 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 GPD1P21695 349 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 KDELR1P24390 212 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 RFC2P35250 354 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 PTPN9P43378 593 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 BCAT1P54687 386 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 SNX1Q13596 522 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 SV2CQ496J9 727 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 C2CD6Q53TS8 623 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 ZC3H12AQ5D1E8 599 aaKnown RBP8.83□□□□□ -1
VTI1A-207ENST00000489357 FBXO47Q5MNV8 452 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 TMEM240Q5SV17 173 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 ERMARDQ5T6L9 678 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 ZNF618Q5T7W0 954 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 IZUMO3Q5VZ72 239 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 PPP1R21Q6ZMI0 780 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 CENPUQ71F23 418 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 SRLQ86TD4 932 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 PSTKQ8IV42 348 aaKnown RBP8.83□□□□□ -1
VTI1A-207ENST00000489357 TDHQ8IZJ6 230 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 OR2W6PQ8NHA6 318 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 MYCBPAPQ8TBZ2 947 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 SPATA18Q8TC71 538 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 ATG4AQ8WYN0 398 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 CPB2Q96IY4 423 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 TNIP3Q96KP6 325 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms