RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RUBCNQ92622 972 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 BBC3Q96PG8 261 aaPredicted RBP4.97□□□□□ -1.61
XRN1-213ENST00000489241 PTDSS2Q9BVG9 487 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 FAM83DQ9H4H8 585 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 ZBTB26Q9HCK0 441 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 SAYSD1Q9NPB0 183 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 LPAR3Q9UBY5 353 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 SWAP70Q9UH65 585 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 HMX3A6NHT5 357 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 AQP7P3A6NL99 342 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 KIAA0355O15063 1070 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 COQ9O75208 318 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 ACTL6BO94805 426 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 NTSR2O95665 410 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 GLP2RO95838 553 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 MAN1A1P33908 653 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 DGKEP52429 567 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 MRPS21P82921 87 aaKnown RBP4.96□□□□□ -1.62
XRN1-213ENST00000489241 RBM20Q5T481 1227 aaKnown RBP4.96□□□□□ -1.62
XRN1-213ENST00000489241 CACHD1Q5VU97 1274 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 ICE2Q659A1 982 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 RETSATQ6NUM9 610 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 CPOQ8IVL8 374 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 CCDC117Q8IWD4 279 aaPredicted RBP4.96□□□□□ -1.62
XRN1-213ENST00000489241 LNX2Q8N448 690 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 B3GALNT2Q8NCR0 500 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 BPIFB1Q8TDL5 484 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 CAVIN3Q969G5 261 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 PYM1Q9BRP8 204 aaKnown RBP4.96□□□□□ -1.62
XRN1-213ENST00000489241 AMBRA1Q9C0C7 1298 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 TP63Q9H3D4 680 aaPredicted RBP4.96□□□□□ -1.62
XRN1-213ENST00000489241 RIC8AQ9NPQ8 531 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 PRDM8Q9NQV8 689 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 FEM1BQ9UK73 627 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 CA14Q9ULX7 337 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 HPSEQ9Y251 543 aa4.96□□□□□ -1.62
XRN1-213ENST00000489241 EPN1Q9Y6I3 576 aaPredicted RBP4.96□□□□□ -1.62
XRN1-213ENST00000489241 OR2W5A6NFC9 320 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 hCG_1984214I3L0E3 225 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 DNPH1O43598 174 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 PIAS2O75928 621 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 RASAL1O95294 804 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 ARP10275 920 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 JUPP14923 745 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 KCNA3P22001 575 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 SLC5A2P31639 672 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 CLK3P49761 638 aaKnown RBP4.95□□□□□ -1.62
XRN1-213ENST00000489241 SEC24CP53992 1094 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 PRKAA2P54646 552 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 NXPH1P58417 271 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 AP2B1P63010 937 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 MPP1Q00013 466 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 ITIH3Q06033 890 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 MYO1EQ12965 1108 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 CUL4BQ13620 913 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 EFR3AQ14156 821 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 SF3B3Q15393 1217 aaKnown RBP4.95□□□□□ -1.62
XRN1-213ENST00000489241 PTCHD3Q3KNS1 767 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 ADCK5Q3MIX3 580 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 HYIQ5T013 277 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 SYCE2Q6PIF2 218 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 SLC44A2Q8IWA5 706 aaPredicted RBP4.95□□□□□ -1.62
XRN1-213ENST00000489241 ESX1Q8N693 406 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 SCAMP5Q8TAC9 235 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 ASB10Q8WXI3 467 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 HERVK_113Q902F9 699 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 PPP2R3CQ969Q6 453 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 FAM136AQ96C01 138 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 PGBD1Q96JS3 809 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 FAM227BQ96M60 508 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 Q96MF0 132 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 SEC62Q99442 399 aaKnown RBP4.95□□□□□ -1.62
XRN1-213ENST00000489241 RTKNQ9BST9 563 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 TPSD1Q9BZJ3 242 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 EPS8L2Q9H6S3 715 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 WASH6PQ9NQA3 447 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 HELLSQ9NRZ9 838 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 MRPS17Q9Y2R5 130 aaKnown RBP4.95□□□□□ -1.62
XRN1-213ENST00000489241 TNFRSF18Q9Y5U5 241 aa4.95□□□□□ -1.62
XRN1-213ENST00000489241 MASP2O00187 686 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 PEX1O43933 1283 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 ANXA6P08133 673 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 PPP3CBP16298 524 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 PPIFP30405 207 aaKnown RBP4.94□□□□□ -1.62
XRN1-213ENST00000489241 CASP2P42575 452 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 BCAT1P54687 386 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 SCAPQ12770 1279 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 ATP1A4Q13733 1029 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 ERCC6LQ2NKX8 1250 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 ARHGAP40Q5TG30 622 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 RSRC2Q7L4I2 434 aaKnown RBP4.94□□□□□ -1.62
XRN1-213ENST00000489241 C2CD5Q86YS7 1000 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.94□□□□□ -1.62
XRN1-213ENST00000489241 SSH3Q8TE77 659 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
XRN1-213ENST00000489241 THAP4Q8WY91 577 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 MAELQ96JY0 434 aaKnown RBP4.94□□□□□ -1.62
XRN1-213ENST00000489241 SLC25A32Q9H2D1 315 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 CXorf36Q9H7Y0 433 aa4.94□□□□□ -1.62
XRN1-213ENST00000489241 KCTD5Q9NXV2 234 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms