RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PBX1P40424 430 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 PRKAA2P54646 552 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 CUL4BQ13620 913 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 CLCA4Q14CN2 919 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 ACOX1Q15067 660 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 TMEM196Q5HYL7 178 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 RHOUQ7L0Q8 258 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 RRAGAQ7L523 313 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 XAGE5Q8WWM1 108 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 FBXL20Q96IG2 436 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 PGBD1Q96JS3 809 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 Q96MF0 132 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 NUDT22Q9BRQ3 303 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 AIFM2Q9BRQ8 373 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 WDR11Q9BZH6 1224 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 SERHL2Q9H4I8 314 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 TAF1DQ9H5J8 278 aaPredicted RBP5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 KLC4Q9NSK0 619 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 NKX1-2Q9UD57 310 aaPredicted RBP5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 DAPP1Q9UN19 280 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 LRRFIP2Q9Y608 721 aaKnown RBP5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 ERCC6L2Q5T890 1561 aa5.71□□□□□ -1.5
PRPF38A-203ENST00000487160 PIPSLA2A3N6 862 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM90A18PA6NE21 464 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM90A16PA6NEW6 464 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM90A9PA6NNJ1 464 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM90A5PA8MXJ8 464 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 PSMD9O00233 223 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 NCAM2O15394 837 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 PPP6R2O75170 966 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 CER1O95813 267 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 AGR2O95994 175 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM90A15PP0C7V4 464 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM90A14PP0C7W9 464 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 PTGS2P35354 604 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 MTAPQ13126 283 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 CSHL1Q14406 222 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 TAF12Q16514 161 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 P3H1Q32P28 736 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 ADCK5Q3MIX3 580 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 FBXO47Q5MNV8 452 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 ANKRD45Q5TZF3 282 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 CCDC70Q6NSX1 233 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 KCNV1Q6PIU1 500 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 DPY19L3Q6ZPD9 716 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 MMS22LQ6ZRQ5 1243 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 MRGPREQ86SM8 312 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 RAB11FIP4Q86YS3 637 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 SPPL3Q8TCT6 385 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 PROKR1Q8TCW9 393 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 CSGALNACT1Q8TDX6 532 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 PNISRQ8TF01 805 aaKnown RBP5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 WDR60Q8WVS4 1066 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 TRAPPC9Q96Q05 1148 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 EIF2AK1Q9BQI3 630 aaKnown RBP5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 MLST8Q9BVC4 326 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 UBA5Q9GZZ9 404 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 BRD8Q9H0E9 1235 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 VPS16Q9H269 839 aa5.7□□□□□ -1.5
PRPF38A-203ENST00000487160 TDRD9Q8NDG6 1382 aaKnown RBP5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 WDR27A2RRH5 827 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 H0Y3Z8 333 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 PEX1O43933 1283 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 RPP40O75818 363 aaKnown RBP5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 WDR47O94967 919 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 TMEM225BP0DP42 221 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 CKMT1AP12532 417 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 ZEB1P37275 1124 aaPredicted RBP5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 PDE1AP54750 535 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 EIF4A1P60842 406 aaKnown RBP5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 EFEMP1Q12805 493 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 FOXE3Q13461 319 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 TUBA3CQ13748 450 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 PTPRRQ15256 657 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 TRIM60Q495X7 471 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 ZNF618Q5T7W0 954 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 TEDDM1Q5T9Z0 273 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 ABHD17BQ5VST6 288 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 MSANTD2Q6P1R3 559 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 NFRKBQ6P4R8 1299 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 TUBA3EQ6PEY2 450 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 PIK3AP1Q6ZUJ8 805 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 RAB11FIP2Q7L804 512 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 AFG1LQ8WV93 481 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 TFAP2BQ92481 460 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 C3orf49Q96BT1 292 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 RSPRY1Q96DX4 576 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 MCRS1Q96EZ8 462 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 ZNF503Q96F45 646 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 TBATAQ96M53 351 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 DPCDQ9BVM2 203 aaPredicted RBP5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 MAF1Q9H063 256 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 ELAC1Q9H777 363 aaKnown RBP5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 EHD3Q9NZN3 535 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 FEM1BQ9UK73 627 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 CNTN6Q9UQ52 1028 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 LZTS1Q9Y250 596 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 REXO2Q9Y3B8 237 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms