RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SOWAHAQ2M3V2 549 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 BANPQ8N9N5 519 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 B3GNT5Q9BYG0 378 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 CDHR5Q9HBB8 845 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 SLCO1B3Q9NPD5 702 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 HES2Q9Y543 173 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 HEY1Q9Y5J3 304 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 TCRBV9S1A1TA0A576 114 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 A8MXQ7 604 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 TM9SF1O15321 606 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 ADCY6O43306 1168 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 NQO1P15559 274 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 RBL1P28749 1068 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 GLRA4Q5JXX5 417 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 ANKLE1Q8NAG6 615 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 MAGEC3Q8TD91 643 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 OSMRQ99650 979 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 DPEP3Q9H4B8 488 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 CD248Q9HCU0 757 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 UBQLN1Q9UMX0 589 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 TLL2Q9Y6L7 1015 aa18.7■□□□□ 0.58
PDLIM7-207ENST00000486828 IQANK1A0A1B0GTG1 560 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 TMEM88BA6NKF7 163 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 RECQL4O94761 1208 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 SMIM10L2AP0DMW4 78 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 SMIM10L2BP0DMW5 78 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 DARSP14868 501 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 SCNN1AP37088 669 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 SKIV2L2P42285 1042 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 MAGEA6P43360 314 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 APLP1P51693 650 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 ZNF200P98182 395 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 BST2Q10589 180 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 SLC26A9Q7LBE3 791 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 ARCQ7LC44 396 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 FAM228AQ86W67 206 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 SLC44A1Q8WWI5 657 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 ZNF75CPQ92670 426 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 C11orf84Q9BUA3 381 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 NXF3Q9H4D5 531 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 PNPLA8Q9NP80 782 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 USH1CQ9Y6N9 552 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 NRCAMQ92823 1304 aa18.69■□□□□ 0.58
PDLIM7-207ENST00000486828 SMIM35A0A1B0GVV1 85 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 YWHAGP61981 247 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 YWHAZP63104 245 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 PTK7Q13308 1070 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 SEPT7Q16181 437 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 KBTBD12Q3ZCT8 623 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 SYCP2LQ5T4T6 812 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 SPRYD7Q5W111 196 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 PLEKHH3Q7Z736 793 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ANKRD52Q8NB46 1076 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 NPLOC4Q8TAT6 608 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 CENPIQ92674 756 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 LPIN3Q9BQK8 851 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 TRIM6Q9C030 488 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 KLC2Q9H0B6 622 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 NRDE2Q9H7Z3 1164 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ETNK2Q9NVF9 386 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 GJD2Q9UKL4 321 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ABT1Q9ULW3 272 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 MBLAC1A4D2B0 266 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 PIRO00625 290 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ATP6V1G2O95670 118 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 MT-ND3P03897 115 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 FGFR1P11362 822 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ALADP13716 330 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 TFE3P19532 575 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 CYP2F1P24903 491 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ADRA1DP25100 572 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 RPL34P49207 117 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ZNF157P51786 506 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 BCAT1P54687 386 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 KCNJ2P63252 427 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 HTRA3P83110 453 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 RIPK1Q13546 671 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 DPYSL2Q16555 572 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 PPP6R3Q5H9R7 873 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 FBXO47Q5MNV8 452 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 C4orf22Q6V702 233 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 ASRGL1Q7L266 308 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 CDKL3Q8IVW4 592 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 CRYBG2Q8N1P7 616 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 AGGF1Q8N302 714 aaeCLIP18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 C7orf31Q8N865 590 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 TCP10LQ8TDR4 215 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 KBTBD7Q8WVZ9 684 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 KLHL29Q96CT2 875 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 CYLDQ9NQC7 956 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 IKBKGQ9Y6K9 419 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 PCNTO95613 3336 aa18.68■□□□□ 0.58
PDLIM7-207ENST00000486828 A6NJR5 290 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 IGF2BP3O00425 579 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 HCRTO43612 131 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 AVILO75366 819 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 F2P00734 622 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 CD4P01730 458 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 INHBAP08476 426 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 CYP2C9P11712 490 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms