RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	EVL	Q9UI08	416 aa	Predicted RBP	11.23	□□□□□ -0.61
HMGN1-215	ENST00000485550	NFATC1	O95644	943 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	STAU1	O95793	577 aa	Known RBP	11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	MBL2	P11226	248 aa	Predicted RBP	11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	CMA1	P23946	247 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	YWHAQ	P27348	245 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	PTGER3	P43115	390 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	SLC6A11	P48066	632 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	NOP14	P78316	857 aa	Known RBP	11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	SCAP	Q12770	1279 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	SPOPL	Q6IQ16	392 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	PAQR9	Q6ZVX9	377 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	FILIP1	Q7Z7B0	1213 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	PIP4P1	Q86T03	277 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	ACOT1	Q86TX2	421 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	RASSF3	Q86WH2	238 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	NUP93	Q8N1F7	819 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	CCDC33	Q8N5R6	958 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	SCAMP5	Q8TAC9	235 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	GOLGA5	Q8TBA6	731 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	EXOC4	Q96A65	974 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	CNOT6L	Q96LI5	555 aa	Known RBP	11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	SPATA32	Q96LK8	384 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	SLITRK1	Q96PX8	696 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	ELOVL4	Q9GZR5	314 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	KCTD10	Q9H3F6	313 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	CELSR3	Q9NYQ7	3312 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	EHD2	Q9NZN4	543 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	CFAP97	Q9P2B7	532 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	MBD1	Q9UIS9	605 aa	Predicted RBP	11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	MAPK8IP1	Q9UQF2	711 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	ZDHHC9	Q9Y397	364 aa		11.22	□□□□□ -0.61
HMGN1-215	ENST00000485550	MYH10	P35580	1976 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	PDXK	O00764	312 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	OAS1	P00973	400 aa	Known RBP	11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	NR3C1	P04150	777 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	RPN1	P04843	607 aa	Known RBP	11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	CFI	P05156	583 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	TCF3	P15923	654 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	RDX	P35241	583 aa	Known RBP	11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	OPRD1	P41143	372 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	SYK	P43405	635 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	PPP3CC	P48454	512 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	PDE6C	P51160	858 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	NDUFA8	P51970	172 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	AP3M2	P53677	418 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	SLC7A9	P82251	487 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	SEMA3B	Q13214	749 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	LPCAT2	Q7L5N7	544 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	FAM35A	Q86V20	835 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	ADGRG2	Q8IZP9	1017 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	USP33	Q8TEY7	942 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	FBXO32	Q969P5	355 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	TNIP3	Q96KP6	325 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	CEP295NL	Q96MC4	621 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	BBC3	Q96PG8	261 aa	Predicted RBP	11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	GTPBP2	Q9BX10	602 aa	Known RBP	11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	VRTN	Q9H8Y1	702 aa		11.21	□□□□□ -0.61
HMGN1-215	ENST00000485550	KNL1	Q8NG31	2342 aa		11.21	□□□□□ -0.62
HMGN1-215	ENST00000485550	FAM221B	A6H8Z2	402 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550		K7EQS6	105 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	AP1G2	O75843	785 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	BEST1	O76090	585 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	CYP17A1	P05093	508 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	CCDC130	P13994	396 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	NDST1	P52848	882 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	SLC5A3	P53794	718 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	ATXN3	P54252	364 aa	Predicted RBP	11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	CLDN10	P78369	228 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	KRT85	P78386	507 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	MESP2	Q0VG99	397 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	DHCR24	Q15392	516 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	CRY1	Q16526	586 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	SGSM1	Q2NKQ1	1148 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	GAB4	Q2WGN9	574 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	RHBDF2	Q6PJF5	856 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	SV2A	Q7L0J3	742 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	SYT12	Q8IV01	421 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	SLC9A9	Q8IVB4	645 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	SFTPA1	Q8IWL2	248 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	FUK	Q8N0W3	1084 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	HDDC3	Q8N4P3	179 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	C12orf29	Q8N999	325 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	OR2I1P	Q8NGU4	316 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	SLC2A14	Q8TDB8	520 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	JAKMIP2	Q96AA8	810 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	CCSER2	Q9H7U1	834 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	MMRN2	Q9H8L6	949 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	ZDHHC4	Q9NPG8	344 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	KRT82	Q9NSB4	513 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	FAM49B	Q9NUQ9	324 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	GMIP	Q9P107	970 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	HMGXB4	Q9UGU5	601 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	MMP17	Q9ULZ9	603 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	HPSE	Q9Y251	543 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	FRMD4B	Q9Y2L6	1034 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	CABIN1	Q9Y6J0	2220 aa		11.2	□□□□□ -0.62
HMGN1-215	ENST00000485550	ATP8B3	O60423	1300 aa		11.19	□□□□□ -0.62

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