RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 EFEMP1Q12805 493 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 ZNF528Q3MIS6 628 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 RAB41Q5JT25 222 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 LY6G5CQ5SRR4 150 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 HEATR6Q6AI08 1181 aaKnown RBP12.91□□□□□ -0.34
MSH5-216ENST00000484309 TRIM65Q6PJ69 517 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 RHBDF2Q6PJF5 856 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 SECISBP2LQ93073 1101 aaKnown RBP12.91□□□□□ -0.34
MSH5-216ENST00000484309 IER2Q9BTL4 223 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 LRRC4Q9HBW1 653 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.91□□□□□ -0.34
MSH5-216ENST00000484309 PTPRZ1P23471 2315 aaPredicted RBP12.91□□□□□ -0.34
MSH5-216ENST00000484309 EP300Q09472 2414 aaPredicted RBP12.91□□□□□ -0.34
MSH5-216ENST00000484309 USP34Q70CQ2 3546 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 OTOGLQ3ZCN5 2332 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 GOLGA6L22H0YM25 854 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ZBED1O96006 694 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ADH1CP00326 375 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 RALAP11233 206 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ADH5P11766 374 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 PRKCSHP14314 528 aaPredicted RBP12.9□□□□□ -0.34
MSH5-216ENST00000484309 DRD1P21728 446 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 USP8P40818 1118 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 FNTBP49356 437 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 PSEN1P49768 467 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ZNF132P52740 706 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 YWHAGP61981 247 aaKnown RBP eCLIP12.9□□□□□ -0.34
MSH5-216ENST00000484309 MESP2Q0VG99 397 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ARHGAP44Q17R89 818 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ANO4Q32M45 955 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 LCLAT1Q6UWP7 414 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 RSRC2Q7L4I2 434 aaKnown RBP12.9□□□□□ -0.34
MSH5-216ENST00000484309 SFTPA1Q8IWL2 248 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 SIX6OS1Q8N1H7 587 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 SYNPOQ8N3V7 929 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 RPLP0P6Q8NHW5 317 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ATRIPQ8WXE1 791 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 UBXN6Q9BZV1 441 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 THAP9Q9H5L6 903 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 ACP6Q9NPH0 428 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 SAMSN1Q9NSI8 373 aaKnown RBP12.9□□□□□ -0.34
MSH5-216ENST00000484309 ZSCAN32Q9NX65 697 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 TBC1D14Q9P2M4 693 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 DNMT3LQ9UJW3 386 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 AJAP1Q9UKB5 411 aaPredicted RBP12.9□□□□□ -0.34
MSH5-216ENST00000484309 SDK1Q7Z5N4 2213 aa12.9□□□□□ -0.34
MSH5-216ENST00000484309 K7ESF4 209 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 PES1O00541 588 aaKnown RBP12.89□□□□□ -0.35
MSH5-216ENST00000484309 GREM1O60565 184 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
MSH5-216ENST00000484309 SETSIPP0DME0 302 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
MSH5-216ENST00000484309 PLA2G4AP47712 749 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 PXNP49023 591 aaPredicted RBP12.89□□□□□ -0.35
MSH5-216ENST00000484309 GOLGA8FQ08AF8 430 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 GOLGA8DPQ0D2H9 430 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 PPP2R5DQ14738 602 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 MAN2A1Q16706 1144 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 PMF1Q6P1K2 205 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 BHLHA9Q7RTU4 235 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 TMEM25Q86YD3 366 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 FAM114A1Q8IWE2 563 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 ZBTB44Q8NCP5 570 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 CLEC4CQ8WTT0 213 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 EDEM1Q92611 657 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 NELL1Q92832 810 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 CLIC5Q9NZA1 410 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
MSH5-216ENST00000484309 KIAA1257Q9ULG3 409 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 GPR179Q6PRD1 2367 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 GVINP1Q7Z2Y8 2422 aa12.89□□□□□ -0.35
MSH5-216ENST00000484309 YJEFN3A6XGL0 299 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 E7ENQ6 273 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 GABBR2O75899 941 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 STC2O76061 302 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
MSH5-216ENST00000484309 PON1P27169 355 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 MFAP3P55082 362 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 GAD2Q05329 585 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 SRSF5Q13243 272 aaKnown RBP12.88□□□□□ -0.35
MSH5-216ENST00000484309 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 CNGA2Q16280 664 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 LPAL2Q16609 132 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 EXOC3L4Q17RC7 722 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 C2orf27AQ580R0 203 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 DENND1BQ6P3S1 775 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 C11orf57Q6ZUT1 292 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms