RNA–Protein interactions for RNA: ENST00000480166.3

RN7SL88P-201, Transcript of RNA, 7SL, cytoplasmic 88, pseudogene, humanhuman

BASIC

Gene RN7SL88P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL88P-201ENST00000480166 DDX42Q86XP3 938 aaKnown RBP eCLIP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 SLC39A11Q8N1S5 342 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 CCDC185Q8N715 623 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 COLGALT1Q8NBJ5 622 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 GPR152Q8TDT2 470 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 AUTS2Q8WXX7 1259 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 RIN2Q8WYP3 895 aaPredicted RBP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 EDEM1Q92611 657 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 MAGOHBQ96A72 148 aaKnown RBP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 ZBTB9Q96C00 473 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 IGSF21Q96ID5 467 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 RBM41Q96IZ5 413 aaKnown RBP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 TTPALQ9BTX7 342 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 DDX23Q9BUQ8 820 aaKnown RBP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 SNRNP25Q9BV90 132 aaKnown RBP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 ANLNQ9NQW6 1124 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 CNGB3Q9NQW8 809 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 ASNSD1Q9NWL6 643 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 LCMT1Q9UIC8 334 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 USP18Q9UMW8 372 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 SLC27A5Q9Y2P5 690 aa7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
RN7SL88P-201ENST00000480166 PTPRSQ13332 1948 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 GOLGA6L10A0A0M3HER8 536 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 TARSL2A2RTX5 802 aaKnown RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 OR6C75A6NL08 312 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 BHMG1C9JSJ3 638 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PRPSAP2O60256 369 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 RNF8O76064 485 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 FBXO21O94952 628 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CSPG5O95196 566 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 ZBED1O96006 694 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 LTFP02788 710 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 LINC00271P0C7V0 271 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PECAM1P16284 738 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 KDELR1P24390 212 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PTPN7P35236 360 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 COILP38432 576 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 MATKP42679 507 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CARSP49589 748 aaKnown RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CDH6P55285 790 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 SNX16P57768 344 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 NME3Q13232 169 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 DPYSL3Q14195 570 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 GRIN2CQ14957 1233 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 MAPRE1Q15691 268 aaKnown RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PSMD5Q16401 504 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 TAZQ16635 292 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CYP1B1Q16678 543 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 HADHQ16836 314 aaKnown RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 DCAF6Q58WW2 860 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 EFHC1Q5JVL4 640 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 WDR93Q6P2C0 686 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 NPNTQ6UXI9 565 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 C4orf50Q6ZRC1 276 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 B4GALNT4Q76KP1 1039 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 SCD5Q86SK9 330 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PRUNE1Q86TP1 453 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 TAC4Q86UU9 113 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 JAMLQ86YT9 394 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 RFX6Q8HWS3 928 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CMTR2Q8IYT2 770 aaKnown RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 RCOR2Q8IZ40 523 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 DCP1BQ8IZD4 617 aaKnown RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PYROXD2Q8N2H3 581 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CMASQ8NFW8 434 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 SLC7A14Q8TBB6 771 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CENPIQ92674 756 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 GDAP1L1Q96MZ0 367 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 ZNF558Q96NG5 402 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 KCTD15Q96SI1 283 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 YME1L1Q96TA2 773 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 NAP1L3Q99457 506 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 NPY6RQ99463 290 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 SEPT5Q99719 369 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 HERC2P3Q9BVR0 1158 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 UBXN6Q9BZV1 441 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 TRIM31Q9BZY9 425 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 DCLK3Q9C098 648 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 NEUROG2Q9H2A3 272 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 DPH5Q9H2P9 285 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 C10orf88Q9H8K7 445 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 NMUR1Q9HB89 426 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PCDH18Q9HCL0 1135 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 EPB41L5Q9HCM4 733 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PIGVQ9NUD9 493 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 OSER1Q9NX31 292 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 DDX56Q9NY93 547 aaKnown RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 STIM2Q9P246 746 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 SAE1Q9UBE0 346 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 MTRRQ9UBK8 725 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PCDHB5Q9Y5E4 795 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 SNX10Q9Y5X0 201 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 CDY1Q9Y6F8 540 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 COL4A4P53420 1690 aaPredicted RBP7.54□□□□□ -1.2
RN7SL88P-201ENST00000480166 PATJQ8NI35 1801 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms