RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ZBTB33Q86T24 672 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 MTMR12Q9C0I1 747 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 RAB6CQ9H0N0 254 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 DDX18Q9NVP1 670 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 HERC5Q9UII4 1024 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 CNTN6Q9UQ52 1028 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 K7ERI5 159 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 KCNN4O15554 427 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 NCF2P19878 526 aaPredicted RBP21.48■■□□□ 1.03
COL13A1-208ENST00000479733 MIPP30301 263 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 TNFSF9P41273 254 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 SH3PXD2AQ5TCZ1 1133 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 SEPT12Q8IYM1 358 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 DEFB107AQ8IZN7 70 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 C17orf75Q9HAS0 396 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 HEY1Q9Y5J3 304 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 QSER1Q2KHR3 1735 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 DGAT1O75907 488 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 COPAP53621 1224 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 FOLH1Q04609 750 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 KCNJ11Q14654 390 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 WDR75Q8IWA0 830 aaKnown RBP21.48■■□□□ 1.03
COL13A1-208ENST00000479733 CCDC33Q8N5R6 958 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 MRIQ9BWK5 157 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 CYTH4Q9UIA0 394 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 PHF24Q9UPV7 400 aa21.48■■□□□ 1.03
COL13A1-208ENST00000479733 ATP6V1B1P15313 513 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 ZNF132P52740 706 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 R3HDM1Q15032 1099 aaKnown RBP21.47■■□□□ 1.03
COL13A1-208ENST00000479733 VPS72Q15906 364 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 FASTKD1Q53R41 847 aaKnown RBP21.47■■□□□ 1.03
COL13A1-208ENST00000479733 AAGABQ6PD74 315 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 MCF2L2Q86YR7 1114 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 THNSL1Q8IYQ7 743 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 TTLL6Q8N841 843 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 STKLD1Q8NE28 680 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 MCPH1Q8NEM0 835 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 ZNF778Q96MU6 729 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 CGRRF1Q99675 332 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 PDCD2LQ9BRP1 358 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 C1orf21Q9H246 121 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 CYP26B1Q9NR63 512 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 RHBDL2Q9NX52 303 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 PCDHGB4Q9UN71 923 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 APOBEC2Q9Y235 224 aaKnown RBP21.47■■□□□ 1.03
COL13A1-208ENST00000479733 PCDHGB5Q9Y5G0 923 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 E2F8A0AVK6 867 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 F5H423 210 aaPredicted RBP21.47■■□□□ 1.03
COL13A1-208ENST00000479733 C1QAP02745 245 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 PTGER2P43116 358 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 PRKCEQ02156 737 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 PPP1R2P3Q6NXS1 205 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 RBM44Q6ZP01 1051 aaKnown RBP21.47■■□□□ 1.03
COL13A1-208ENST00000479733 DPH6Q7L8W6 267 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 NIPA2Q8N8Q9 360 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 TCHPQ9BT92 498 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 CCDC28BQ9BUN5 200 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 ZNF341Q9BYN7 854 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 SLC17A6Q9P2U8 582 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 NXF1Q9UBU9 619 aaKnown RBP21.47■■□□□ 1.03
COL13A1-208ENST00000479733 TBC1D30Q9Y2I9 924 aa21.47■■□□□ 1.03
COL13A1-208ENST00000479733 EDN1P05305 212 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 NPR1P16066 1061 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 AOC1P19801 751 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 CHN2P52757 468 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 CDH6P55285 790 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 CCDC60Q8IWA6 550 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-208ENST00000479733 DEPTORQ8TB45 409 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 PLAC1Q9HBJ0 212 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 TMOD2Q9NZR1 351 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 CDH22Q9UJ99 828 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-208ENST00000479733 MYOCOSA0A1B0GUC4 107 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 SNNO75324 88 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-208ENST00000479733 NPM3O75607 178 aaKnown RBP21.46■■□□□ 1.03
COL13A1-208ENST00000479733 LSM8O95777 96 aaKnown RBP21.46■■□□□ 1.03
COL13A1-208ENST00000479733 TSHRP16473 764 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 OSBPP22059 807 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 TAP1Q03518 808 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 ADGRF2Q8IZF7 708 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 ICA1LQ8NDH6 482 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 MIS12Q9H081 205 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 POPDC2Q9HBU9 364 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL13A1-208ENST00000479733 PNPOQ9NVS9 261 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 THAP1Q9NVV9 213 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 USP21Q9UK80 565 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 POMPQ9Y244 141 aa21.46■■□□□ 1.03
COL13A1-208ENST00000479733 C15orf38-AP3S2A0A0A6YYH1 394 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 HMX2A2RU54 273 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 TTLL13PA6NNM8 815 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 SIN3BO75182 1162 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 KRT38O76015 456 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 CDO1Q16878 200 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 ARPINQ7Z6K5 226 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 UNC5BQ8IZJ1 945 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 ATP6V0A1Q93050 837 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 INPP5FQ9Y2H2 1132 aa21.45■■□□□ 1.03
COL13A1-208ENST00000479733 LTBP1Q14766 1721 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 CNTNAP2Q9UHC6 1331 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms