RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 XPO6Q96QU8 1125 aaKnown RBP15.85■□□□□ 0.13
PRKN-207ENST00000479615 ARHGEF4Q9NR80 690 aa15.85■□□□□ 0.13
PRKN-207ENST00000479615 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.85■□□□□ 0.13
PRKN-207ENST00000479615 DLL3Q9NYJ7 618 aa15.85■□□□□ 0.13
PRKN-207ENST00000479615 DEC1Q9P2X7 70 aa15.85■□□□□ 0.13
PRKN-207ENST00000479615 NAGPAQ9UK23 515 aa15.85■□□□□ 0.13
PRKN-207ENST00000479615 MMP17Q9ULZ9 603 aa15.85■□□□□ 0.13
PRKN-207ENST00000479615 USP18Q9UMW8 372 aa15.85■□□□□ 0.13
PRKN-207ENST00000479615 PCDHGA5Q9Y5G8 931 aa15.85■□□□□ 0.13
PRKN-207ENST00000479615 TRIM49BA6NDI0 452 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 CYP26A1O43174 497 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 PAEPP09466 180 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 VDRP11473 427 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 MORC3Q14149 939 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 STILQ15468 1287 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 SGO2Q562F6 1265 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 RAB41Q5JT25 222 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 EOGTQ5NDL2 527 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 C10orf120Q5SQS8 335 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 NAIF1Q69YI7 327 aaPredicted RBP15.84■□□□□ 0.13
PRKN-207ENST00000479615 TTI2Q6NXR4 508 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 GPRIN1Q7Z2K8 1008 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 BBS7Q8IWZ6 715 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 NELFBQ8WX92 580 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 EZH1Q92800 747 aaPredicted RBP15.84■□□□□ 0.13
PRKN-207ENST00000479615 ERCC4Q92889 916 aaPredicted RBP15.84■□□□□ 0.13
PRKN-207ENST00000479615 JAKMIP2Q96AA8 810 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 NT5C1BQ96P26 610 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 DCLK3Q9C098 648 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 MARK1Q9P0L2 795 aa15.84■□□□□ 0.13
PRKN-207ENST00000479615 A0A1W2PQH9 124 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 PPP1R3GB7ZBB8 358 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 XPO1O14980 1071 aaKnown RBP15.83■□□□□ 0.12
PRKN-207ENST00000479615 RHOBTB1O94844 696 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 TGM1P22735 817 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 CHKAP35790 457 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 BCAT1P54687 386 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 MARSP56192 900 aaKnown RBP15.83■□□□□ 0.12
PRKN-207ENST00000479615 UBE2HP62256 183 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 PAK1Q13153 545 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 E2F5Q15329 346 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 ELF2Q15723 593 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 CRY1Q16526 586 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 LPAL2Q16609 132 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 ANO4Q32M45 955 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 USP39Q53GS9 565 aaKnown RBP15.83■□□□□ 0.12
PRKN-207ENST00000479615 C2orf27AQ580R0 203 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 SMYD5Q6GMV2 418 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 PIGZQ86VD9 579 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 ETFBKMTQ8IXQ9 262 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 FAM160A2Q8N612 972 aaPredicted RBP15.83■□□□□ 0.12
PRKN-207ENST00000479615 RMDN1Q96DB5 314 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 ARID3AQ99856 593 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 POLMQ9NP87 494 aaPredicted RBP15.83■□□□□ 0.12
PRKN-207ENST00000479615 SEMA4GQ9NTN9 838 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 STRIP2Q9ULQ0 834 aa15.83■□□□□ 0.12
PRKN-207ENST00000479615 HELZP42694 1942 aaKnown RBP15.82■□□□□ 0.12
PRKN-207ENST00000479615 TBC1D3BA6NDS4 549 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 GREM1O60565 184 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 TBX18O95935 607 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 ZBED1O96006 694 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 SETSIPP0DME0 302 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 SLC6A11P48066 632 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 SPEM2Q0P670 501 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 BST2Q10589 180 aaKnown RBP15.82■□□□□ 0.12
PRKN-207ENST00000479615 BYSLQ13895 437 aaKnown RBP15.82■□□□□ 0.12
PRKN-207ENST00000479615 PM20D1Q6GTS8 502 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 ISM2Q6H9L7 571 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 KLHL10Q6JEL2 608 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 DGLUCYQ7Z3D6 616 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 RASSF3Q86WH2 238 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 TMEM25Q86YD3 366 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 CNOT6LQ96LI5 555 aaKnown RBP15.82■□□□□ 0.12
PRKN-207ENST00000479615 FAM81BQ96LP2 452 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 HHIPQ96QV1 700 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 RTKNQ9BST9 563 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 NMUR1Q9HB89 426 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 LRRC4Q9HBW1 653 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 OLA1Q9NTK5 396 aaKnown RBP15.82■□□□□ 0.12
PRKN-207ENST00000479615 OSER1Q9NX31 292 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 TSPAN16Q9UKR8 245 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 CDV3Q9UKY7 258 aaKnown RBP15.82■□□□□ 0.12
PRKN-207ENST00000479615 STARD13Q9Y3M8 1113 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 SPTBN4Q9H254 2564 aa15.82■□□□□ 0.12
PRKN-207ENST00000479615 CACNG3O60359 315 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 TULP3O75386 442 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 IRF1P10914 325 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 PRKCSHP14314 528 aaPredicted RBP15.81■□□□□ 0.12
PRKN-207ENST00000479615 CD19P15391 556 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 CD44P16070 742 aaKnown RBP15.81■□□□□ 0.12
PRKN-207ENST00000479615 KIR2DL1P43626 348 aaPredicted RBP15.81■□□□□ 0.12
PRKN-207ENST00000479615 PXNP49023 591 aaPredicted RBP15.81■□□□□ 0.12
PRKN-207ENST00000479615 PGFP49763 221 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 SEC13P55735 322 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 GCNT1Q02742 428 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 SRSF5Q13243 272 aaKnown RBP15.81■□□□□ 0.12
PRKN-207ENST00000479615 RSPO4Q2I0M5 234 aaPredicted RBP15.81■□□□□ 0.12
PRKN-207ENST00000479615 SDE2Q6IQ49 451 aa15.81■□□□□ 0.12
PRKN-207ENST00000479615 RSRC2Q7L4I2 434 aaKnown RBP15.81■□□□□ 0.12
PRKN-207ENST00000479615 SCD5Q86SK9 330 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms