RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 C1QTNF3-AMACRE9PGA6 284 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 PODXLO00592 558 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 SKAP2O75563 359 aaPredicted RBP5.86□□□□□ -1.47
RFC4-212ENST00000479307 PIAS2O75928 621 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 SRGNP10124 158 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
RFC4-212ENST00000479307 GABRB3P28472 473 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 PRKAG1P54619 331 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 PUM3Q15397 648 aaKnown RBP5.86□□□□□ -1.47
RFC4-212ENST00000479307 CERCAMQ5T4B2 595 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 CACHD1Q5VU97 1274 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 ARL6IP4Q66PJ3 421 aaKnown RBP5.86□□□□□ -1.47
RFC4-212ENST00000479307 RGS7BPQ6MZT1 257 aaPredicted RBP5.86□□□□□ -1.47
RFC4-212ENST00000479307 SLC15A3Q8IY34 581 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 HAS1Q92839 578 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 FAM136AQ96C01 138 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 TRIM5Q9C035 493 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 CXorf36Q9H7Y0 433 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 TBCCD1Q9NVR7 557 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 RGL1Q9NZL6 768 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 SLC39A10Q9ULF5 831 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 TBC1D30Q9Y2I9 924 aa5.86□□□□□ -1.47
RFC4-212ENST00000479307 KNDC1Q76NI1 1749 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 KIAA1210Q9ULL0 1709 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 NRXN1Q9ULB1 1477 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 TECPR2O15040 1411 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 NCANO14594 1321 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 hCG_1642624A0A1W2PR95 340 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 FAM234BA2RU67 622 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 B8ZZF3 427 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 hCG_1984214I3L0E3 225 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 PRRG2O14669 202 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 SPDEFO95238 335 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 RASAL1O95294 804 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 C1SP09871 688 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 TYRP1P17643 537 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 EGR1P18146 543 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 GATA3P23771 443 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 PDE6CP51160 858 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 BLOC1S1P78537 153 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 ITIH3Q06033 890 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 BLMHQ13867 455 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 TRIM14Q14142 442 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 MRNIPQ6NTE8 343 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 RHOUQ7L0Q8 258 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 LNX2Q8N448 690 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.85□□□□□ -1.47
RFC4-212ENST00000479307 GLIS1Q8NBF1 620 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 PPP2R3CQ969Q6 453 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 MUL1Q969V5 352 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 AMBRA1Q9C0C7 1298 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 ZBTB26Q9HCK0 441 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 TMEM8AQ9HCN3 771 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 MRPS17Q9Y2R5 130 aaKnown RBP5.85□□□□□ -1.47
RFC4-212ENST00000479307 LRRC37A3O60309 1634 aa5.85□□□□□ -1.47
RFC4-212ENST00000479307 TULP4Q9NRJ4 1543 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 ANKRD30AQ9BXX3 1397 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 CD3EAPO15446 510 aaKnown RBP5.84□□□□□ -1.47
RFC4-212ENST00000479307 PROM1O43490 865 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 RGS10O43665 173 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 SRGAP2O75044 1071 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 NDST3O95803 873 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 CSF1RP07333 972 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 SLC5A2P31639 672 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 BUD31P41223 144 aaPredicted RBP5.84□□□□□ -1.47
RFC4-212ENST00000479307 NXPH1P58417 271 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 TUBA3CQ13748 450 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 CCNIQ14094 377 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 RAB30Q15771 203 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 MAPKAPK3Q16644 382 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 SLC5A9Q2M3M2 681 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 MIIPQ5JXC2 388 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 TEDDM1Q5T9Z0 273 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 VPS53Q5VIR6 699 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 ANO1Q5XXA6 986 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 TUBA3EQ6PEY2 450 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 KIAA0408Q6ZU52 694 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 B3GALNT2Q8NCR0 500 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 PTCD3Q96EY7 689 aaKnown RBP5.84□□□□□ -1.47
RFC4-212ENST00000479307 ZNF503Q96F45 646 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 FAM227BQ96M60 508 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 TPSD1Q9BZJ3 242 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.84□□□□□ -1.474e-15■■□□□ 11.5
RFC4-212ENST00000479307 CA14Q9ULX7 337 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 SSX2IPQ9Y2D8 614 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 HS3ST4Q9Y661 456 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 CLTCL1P53675 1640 aa5.84□□□□□ -1.47
RFC4-212ENST00000479307 PHRF1Q9P1Y6 1649 aaKnown RBP5.84□□□□□ -1.47
RFC4-212ENST00000479307 ATP7BP35670 1465 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 OVOS2A0A0G2JMS6 1433 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 OVOS2A0A0J9YW53 1432 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 OVOS2Q6IE36 1432 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 WNK3Q9BYP7 1800 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 DHX57Q6P158 1386 aaKnown RBP5.83□□□□□ -1.48
RFC4-212ENST00000479307 UNC119BA6NIH7 251 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 TLR5O60602 858 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 COQ9O75208 318 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 CSTBP04080 98 aaKnown RBP5.83□□□□□ -1.48
RFC4-212ENST00000479307 PPP3CBP16298 524 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms