RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 CNR2P34972 360 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 GALK1P51570 392 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 COPB1P53618 953 aaKnown RBP19.04■□□□□ 0.64
SNX4-204ENST00000473417 MFAP3P55082 362 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 KCNMA1Q12791 1236 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 ARHGAP44Q17R89 818 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 LAIR1Q6GTX8 287 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 RBBP8NLQ8NC74 664 aaPredicted RBP19.04■□□□□ 0.64
SNX4-204ENST00000473417 PDZD8Q8NEN9 1154 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 ANKRD20A12PQ8NF67 263 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 OVCA2Q8WZ82 227 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 EXOC4Q96A65 974 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 JAKMIP2Q96AA8 810 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 SIX2Q9NPC8 291 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 IL37Q9NZH6 218 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 APEX2Q9UBZ4 518 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 LIMA1Q9UHB6 759 aaKnown RBP19.04■□□□□ 0.64
SNX4-204ENST00000473417 CPQQ9Y646 472 aa19.04■□□□□ 0.64
SNX4-204ENST00000473417 BECN2A8MW95 431 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 HRO43593 1189 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 NFATC1O95644 943 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 CALCAP01258 141 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 ATP1A3P13637 1013 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 KRT5P13647 590 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 YWHAQP27348 245 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 SLC5A3P53794 718 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 PUM1Q14671 1186 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNX4-204ENST00000473417 FBXO43Q4G163 708 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 SGO2Q562F6 1265 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 ARHGAP17Q68EM7 881 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 HEATR6Q6AI08 1181 aaKnown RBP19.03■□□□□ 0.64
SNX4-204ENST00000473417 CLEC20AQ6ZU45 233 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 WDR5BQ86VZ2 330 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 EZH1Q92800 747 aaPredicted RBP19.03■□□□□ 0.64
SNX4-204ENST00000473417 CD101Q93033 1021 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 FBXO32Q969P5 355 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 LINC00597Q9H2U6 94 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 CSNK1G1Q9HCP0 422 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 GMEB2Q9UKD1 530 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 RAB23Q9ULC3 237 aa19.03■□□□□ 0.64
SNX4-204ENST00000473417 FAM92AA1XBS5 289 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 ATG13O75143 517 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 ABL1P00519 1130 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 PAEPP09466 180 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 VDRP11473 427 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 NR1H3Q13133 447 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 SRSF5Q13243 272 aaKnown RBP19.02■□□□□ 0.64
SNX4-204ENST00000473417 IQCB1Q15051 598 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 LPAL2Q16609 132 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 SNX30Q5VWJ9 437 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 ENOSF1Q7L5Y1 443 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 SCAMP5Q8TAC9 235 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 FAM81BQ96LP2 452 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 LSM14BQ9BX40 385 aaKnown RBP19.02■□□□□ 0.64
SNX4-204ENST00000473417 DUSP16Q9BY84 665 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 CBX8Q9HC52 389 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 DLL3Q9NYJ7 618 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 DNAJC12Q9UKB3 198 aa19.02■□□□□ 0.64
SNX4-204ENST00000473417 AJAP1Q9UKB5 411 aaPredicted RBP19.02■□□□□ 0.64
SNX4-204ENST00000473417 TGM1P22735 817 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 USP8P40818 1118 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 SIM2Q14190 667 aaPredicted RBP19.01■□□□□ 0.63
SNX4-204ENST00000473417 GOLGA7BQ2TAP0 167 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 GAB4Q2WGN9 574 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 FKBP15Q5T1M5 1219 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 DPY19L2P1Q6NXN4 242 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 PRR23BQ6ZRT6 265 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 DGLUCYQ7Z3D6 616 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 DDX42Q86XP3 938 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNX4-204ENST00000473417 TFAP2BQ92481 460 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 PARD6AQ9NPB6 346 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 COMMD8Q9NX08 183 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 SMPD4Q9NXE4 827 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 TSPAN16Q9UKR8 245 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 KIAA1257Q9ULG3 409 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 CNTN6Q9UQ52 1028 aa19.01■□□□□ 0.63
SNX4-204ENST00000473417 CCDC163A0A0D9SF12 145 aa19■□□□□ 0.63
SNX4-204ENST00000473417 LRRC10BA6NIK2 292 aa19■□□□□ 0.63
SNX4-204ENST00000473417 CYP17A1P05093 508 aa19■□□□□ 0.63
SNX4-204ENST00000473417 ZDHHC11BP0C7U3 371 aa19■□□□□ 0.63
SNX4-204ENST00000473417 MBL2P11226 248 aaPredicted RBP19■□□□□ 0.63
SNX4-204ENST00000473417 SDHBP21912 280 aa19■□□□□ 0.63
SNX4-204ENST00000473417 BRD2P25440 801 aaKnown RBP19■□□□□ 0.63
SNX4-204ENST00000473417 OPRD1P41143 372 aa19■□□□□ 0.63
SNX4-204ENST00000473417 KLK7P49862 253 aa19■□□□□ 0.63
SNX4-204ENST00000473417 ZNF132P52740 706 aa19■□□□□ 0.63
SNX4-204ENST00000473417 KLHDC7AQ5VTJ3 777 aa19■□□□□ 0.63
SNX4-204ENST00000473417 APTXQ7Z2E3 356 aaKnown RBP19■□□□□ 0.63
SNX4-204ENST00000473417 GPRIN1Q7Z2K8 1008 aa19■□□□□ 0.63
SNX4-204ENST00000473417 LUZP1Q86V48 1076 aa19■□□□□ 0.63
SNX4-204ENST00000473417 TTC30AQ86WT1 665 aa19■□□□□ 0.63
SNX4-204ENST00000473417 ANKRD52Q8NB46 1076 aa19■□□□□ 0.63
SNX4-204ENST00000473417 RPLP0P6Q8NHW5 317 aa19■□□□□ 0.63
SNX4-204ENST00000473417 ZFRQ96KR1 1074 aaKnown RBP19■□□□□ 0.63
SNX4-204ENST00000473417 ZSWIM1Q9BR11 485 aa19■□□□□ 0.63
SNX4-204ENST00000473417 CFAP97Q9P2B7 532 aa19■□□□□ 0.63
SNX4-204ENST00000473417 HESX1Q9UBX0 185 aa19■□□□□ 0.63
SNX4-204ENST00000473417 SLC8A2Q9UPR5 921 aa19■□□□□ 0.63
SNX4-204ENST00000473417 LGALS16A8MUM7 142 aa18.99■□□□□ 0.63
SNX4-204ENST00000473417 HHLA1C9JL84 531 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms