RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 FOXN3O00409 490 aaPredicted RBP17.6■□□□□ 0.41
TSPO-205ENST00000472378 COL9A1P20849 921 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 CWF19L1Q69YN2 538 aaKnown RBP17.6■□□□□ 0.41
TSPO-205ENST00000472378 PMF1Q6P1K2 205 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 DHX40Q8IX18 779 aaKnown RBP17.6■□□□□ 0.41
TSPO-205ENST00000472378 CCDC26Q8TAB7 109 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 ZSWIM1Q9BR11 485 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 IER2Q9BTL4 223 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 ST7Q9NRC1 585 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 FAM207AQ9NSI2 230 aaPredicted RBP17.6■□□□□ 0.41
TSPO-205ENST00000472378 GTSE1Q9NYZ3 720 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 PCDHGC3Q9UN70 934 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 ZNF510Q9Y2H8 683 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 FHOD1Q9Y613 1164 aa17.6■□□□□ 0.41
TSPO-205ENST00000472378 KIF26AQ9ULI4 1882 aaPredicted RBP17.59■□□□□ 0.41
TSPO-205ENST00000472378 ADH1CP00326 375 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 CCDC172P0C7W6 258 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 LCP1P13796 627 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 CTHP32929 405 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 GPD2P43304 727 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 RPS9P46781 194 aaKnown RBP17.59■□□□□ 0.41
TSPO-205ENST00000472378 APBA1Q02410 837 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 LRRC32Q14392 662 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 SYCP1Q15431 976 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 DGKKQ5KSL6 1271 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 SCD5Q86SK9 330 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 MSANTD4Q8NCY6 345 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
TSPO-205ENST00000472378 DCLK3Q9C098 648 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 MIS12Q9H081 205 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 ECT2Q9H8V3 914 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 NMUR1Q9HB89 426 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 MIA3Q5JRA6 1907 aa17.59■□□□□ 0.41
TSPO-205ENST00000472378 F8VZ95 297 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 SERPINC1P01008 464 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 RGS7P49802 495 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 POLR2FP61218 127 aaKnown RBP17.58■□□□□ 0.4
TSPO-205ENST00000472378 EML3Q32P44 896 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 PREPLQ4J6C6 727 aaPredicted RBP17.58■□□□□ 0.4
TSPO-205ENST00000472378 BSPRYQ5W0U4 402 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 ZNF677Q86XU0 584 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 KLF16Q9BXK1 252 aaPredicted RBP17.58■□□□□ 0.4
TSPO-205ENST00000472378 MARCH2Q9P0N8 246 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 SIK3Q9Y2K2 1263 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 WNT6Q9Y6F9 365 aa17.58■□□□□ 0.4
TSPO-205ENST00000472378 TULP2O00295 520 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 ATP1A3P13637 1013 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 CYP11B1P15538 503 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 CLCN1P35523 988 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 STAT1P42224 750 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 RPL34P49207 117 aaKnown RBP17.57■□□□□ 0.4
TSPO-205ENST00000472378 VCPP55072 806 aaKnown RBP17.57■□□□□ 0.4
TSPO-205ENST00000472378 DAOAP59103 153 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 TNK2Q07912 1038 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 GRSF1Q12849 480 aaKnown RBP eCLIP17.57■□□□□ 0.4
TSPO-205ENST00000472378 IQCB1Q15051 598 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 DPY19L2P1Q6NXN4 242 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 HTR3DQ70Z44 454 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 CACNA2D4Q7Z3S7 1137 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 TMEM110Q86TL2 294 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 ADGRG2Q8IZP9 1017 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 SYNPOQ8N3V7 929 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 TMEM105Q8N8V8 129 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 IPO4Q8TEX9 1081 aaKnown RBP17.57■□□□□ 0.4
TSPO-205ENST00000472378 CLDN23Q96B33 292 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 SLC4A5Q9BY07 1137 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 FOXQ1Q9C009 403 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 GANQ9H2C0 597 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 HSD3B7Q9H2F3 369 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 SYNCQ9H7C4 482 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 HPS4Q9NQG7 708 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 OSER1Q9NX31 292 aa17.57■□□□□ 0.4
TSPO-205ENST00000472378 NDRG2Q9UN36 371 aaKnown RBP17.57■□□□□ 0.4
TSPO-205ENST00000472378 GALR2O43603 387 aaPredicted RBP17.56■□□□□ 0.4
TSPO-205ENST00000472378 LSM8O95777 96 aaKnown RBP17.56■□□□□ 0.4
TSPO-205ENST00000472378 TBX18O95935 607 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 LTFP02788 710 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 TPM3P06753 285 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 ARSAP15289 507 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 CD72P21854 359 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 ZXDBP98169 803 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 EFEMP1Q12805 493 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 PPP2R5DQ14738 602 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 TRIM68Q6AZZ1 485 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 DENND1BQ6P3S1 775 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 NUDT18Q6ZVK8 323 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 BEND5Q7L4P6 421 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 SLC47A2Q86VL8 602 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 MIB1Q86YT6 1006 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 CCDC105Q8IYK2 499 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 DTWD2Q8NBA8 298 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 ZFRQ96KR1 1074 aaKnown RBP17.56■□□□□ 0.4
TSPO-205ENST00000472378 CBX8Q9HC52 389 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 RTN4Q9NQC3 1192 aaKnown RBP17.56■□□□□ 0.4
TSPO-205ENST00000472378 RASAL2Q9UJF2 1139 aa17.56■□□□□ 0.4
TSPO-205ENST00000472378 HBS1LQ9Y450 684 aaKnown RBP17.56■□□□□ 0.4
TSPO-205ENST00000472378 KMT2EQ8IZD2 1858 aa17.55■□□□□ 0.4
TSPO-205ENST00000472378 A0A1W2PQC6 194 aa17.55■□□□□ 0.4
TSPO-205ENST00000472378 YJEFN3A6XGL0 299 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms