RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 FAM118BQ9BPY3 351 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 MID2Q9UJV3 735 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 CAPN11Q9UMQ6 739 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 ARHGAP35Q9NRY4 1499 aa6.66□□□□□ -1.34
CCDC39-202ENST00000471307 SMIM35A0A1B0GVV1 85 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 RAB27BO00194 218 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 SPRY2O43597 315 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 GCATO75600 419 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 CREB1P16220 341 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 IL1R2P27930 398 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 SEMA5AQ13591 1074 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 ST3GAL2Q16842 350 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 CYB5RLQ6IPT4 315 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 TTC8Q8TAM2 541 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 ZNF398Q8TD17 642 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 ZDHHC12Q96GR4 267 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 SH2D3AQ9BRG2 576 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 NUP62CLQ9H1M0 184 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 MGAT4CQ9UBM8 478 aa6.65□□□□□ -1.34
CCDC39-202ENST00000471307 NKX1-2Q9UD57 310 aaPredicted RBP6.65□□□□□ -1.34
CCDC39-202ENST00000471307 H3BNC9 293 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 EXOC5O00471 708 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 TP73O15350 636 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 MOSPD3O75425 235 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 BCAR3O75815 825 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 PARP1P09874 1014 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 BTF3P20290 206 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 CARSP49589 748 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 DIO1P49895 249 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 KLF9Q13886 244 aaPredicted RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 CLCA4Q14CN2 919 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 TRIP6Q15654 476 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 EPHA10Q5JZY3 1008 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 MEX3CQ5U5Q3 659 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 KRT78Q8N1N4 520 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 TSR2Q969E8 191 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 TTC17Q96AE7 1141 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 UNKQ9C0B0 810 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 METTL14Q9HCE5 456 aaKnown RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 TUBA8Q9NY65 449 aaPredicted RBP6.64□□□□□ -1.35
CCDC39-202ENST00000471307 DNAJB11Q9UBS4 358 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 STEAP1Q9UHE8 339 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 CLASP1Q7Z460 1538 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 SAMD9Q5K651 1589 aa6.64□□□□□ -1.35
CCDC39-202ENST00000471307 A1BGP04217 495 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 APEHP13798 732 aaKnown RBP6.63□□□□□ -1.35
CCDC39-202ENST00000471307 HGFP14210 728 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 SFPQP23246 707 aaKnown RBP eCLIP6.63□□□□□ -1.35
CCDC39-202ENST00000471307 LARS2Q15031 903 aaKnown RBP6.63□□□□□ -1.35
CCDC39-202ENST00000471307 FMN1Q68DA7 1419 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 PLAG1Q6DJT9 500 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 UNC13DQ70J99 1090 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 GLCCI1Q86VQ1 547 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
CCDC39-202ENST00000471307 PRG4Q92954 1404 aaPredicted RBP6.63□□□□□ -1.35
CCDC39-202ENST00000471307 DISP1Q96F81 1524 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 WDYHV1Q96HA8 205 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 ZBTB45Q96K62 511 aaPredicted RBP6.63□□□□□ -1.35
CCDC39-202ENST00000471307 ARAP1Q96P48 1450 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 TMEM79Q9BSE2 394 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 BRIP1Q9BX63 1249 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 ITGB1BP2Q9UKP3 347 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 RIMKLBQ9ULI2 386 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 MAFFQ9ULX9 164 aa6.63□□□□□ -1.35
CCDC39-202ENST00000471307 SCAF8Q9UPN6 1271 aaKnown RBP6.63□□□□□ -1.35
CCDC39-202ENST00000471307 SHROOM2Q13796 1616 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 VPS8Q8N3P4 1428 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 E5RJQ4 531 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 RNF8O76064 485 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 TOP3BO95985 862 aaKnown RBP6.62□□□□□ -1.35
CCDC39-202ENST00000471307 MT-ND5P03915 603 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 MMP13P45452 471 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 ITGA8P53708 1063 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 CFHR3Q02985 330 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 ETFDHQ16134 617 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 TMEM65Q6PI78 240 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 C14orf80Q86SX3 495 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 PIGOQ8TEQ8 1089 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 SNX22Q96L94 193 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 PDGFCQ9NRA1 345 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 ZNF212Q9UDV6 495 aa6.62□□□□□ -1.35
CCDC39-202ENST00000471307 FHOD3Q2V2M9 1422 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 DSCR3O14972 297 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 SNX2O60749 519 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 ATF3P18847 181 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 COPB1P53618 953 aaKnown RBP6.61□□□□□ -1.35
CCDC39-202ENST00000471307 STK3Q13188 491 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 GALEQ14376 348 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 ZNF268Q14587 947 aaPredicted RBP6.61□□□□□ -1.35
CCDC39-202ENST00000471307 SLC2A7Q6PXP3 512 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 VSTM1Q6UX27 236 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 PNPLA1Q8N8W4 532 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 PNISRQ8TF01 805 aaKnown RBP6.61□□□□□ -1.35
CCDC39-202ENST00000471307 VPS50Q96JG6 964 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 FAM227BQ96M60 508 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 FCRL4Q96PJ5 515 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 HIST1H2AAQ96QV6 131 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 VPS51Q9UID3 782 aa6.61□□□□□ -1.35
CCDC39-202ENST00000471307 KIAA0556O60303 1618 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms