RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 TDRD10Q5VZ19 366 aaKnown RBP12.22□□□□□ -0.45
HLA-C-206ENST00000470363 KRT39Q6A163 491 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 GJB7Q6PEY0 223 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 PRR23CQ6ZRP0 262 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 SYT13Q7L8C5 426 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 KBTBD6Q86V97 674 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 CPA6Q8N4T0 437 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 EHBP1Q8NDI1 1231 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 LMO3Q8TAP4 145 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 CD101Q93033 1021 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 LOXL4Q96JB6 756 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 INTS2Q9H0H0 1204 aaKnown RBP12.22□□□□□ -0.45
HLA-C-206ENST00000470363 SIX2Q9NPC8 291 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 EBF1Q9UH73 591 aa12.22□□□□□ -0.45
HLA-C-206ENST00000470363 AJAP1Q9UKB5 411 aaPredicted RBP12.22□□□□□ -0.45
HLA-C-206ENST00000470363 CDV3Q9UKY7 258 aaKnown RBP12.22□□□□□ -0.45
HLA-C-206ENST00000470363 ITIH6Q6UXX5 1313 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 A0A0A0MRY4 1105 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 LEFTY2O00292 366 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 CLDN5O00501 218 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 RPP40O75818 363 aaKnown RBP12.21□□□□□ -0.45
HLA-C-206ENST00000470363 VNN1O95497 513 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 GYPCP04921 128 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 PTMAP06454 111 aaKnown RBP12.21□□□□□ -0.45
HLA-C-206ENST00000470363 ZNF806P0C7X5 589 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 CASP14P31944 242 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 CDH8P55286 799 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 MESP2Q0VG99 397 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 TAF10Q12962 218 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 ZACNQ401N2 412 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 SNX30Q5VWJ9 437 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 NEK11Q8NG66 645 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 OR6B3Q8NGW1 331 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 NETO1Q8TDF5 533 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 TATDN2Q93075 761 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 ZFRQ96KR1 1074 aaKnown RBP12.21□□□□□ -0.45
HLA-C-206ENST00000470363 SDCBP2Q9H190 292 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 SNX25Q9H3E2 840 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 NLRC4Q9NPP4 1024 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 RXFP3Q9NSD7 469 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 TRPM5Q9NZQ8 1165 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 SLC8A2Q9UPR5 921 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 COQ4Q9Y3A0 265 aa12.21□□□□□ -0.45
HLA-C-206ENST00000470363 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.45
HLA-C-206ENST00000470363 PTPRDP23468 1912 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.2□□□□□ -0.46
HLA-C-206ENST00000470363 FAM92AA1XBS5 289 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 GTPBP10A4D1E9 387 aaKnown RBP12.2□□□□□ -0.46
HLA-C-206ENST00000470363 P4HA2O15460 535 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 EPN2O95208 641 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 ZDHHC11BP0C7U3 371 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 TRIM21P19474 475 aaKnown RBP12.2□□□□□ -0.46
HLA-C-206ENST00000470363 PIK3CAP42336 1068 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 IFNAR2P48551 515 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 PDE6CP51160 858 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 ADKP55263 362 aaKnown RBP12.2□□□□□ -0.46
HLA-C-206ENST00000470363 POLR2FP61218 127 aaKnown RBP12.2□□□□□ -0.46
HLA-C-206ENST00000470363 CETN1Q12798 172 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 PLK5Q496M5 336 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 KLHDC7AQ5VTJ3 777 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 SPOPLQ6IQ16 392 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 TRIM65Q6PJ69 517 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 RHBDF2Q6PJF5 856 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 CACNA2D4Q7Z3S7 1137 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 ARHGEF19Q8IW93 802 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 FBXL13Q8NEE6 735 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 RPLP0P6Q8NHW5 317 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 USP33Q8TEY7 942 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 ELOVL4Q9GZR5 314 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 GANQ9H2C0 597 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 SMYD3Q9H7B4 428 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 RAB20Q9NX57 234 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
HLA-C-206ENST00000470363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.2□□□□□ -0.46
HLA-C-206ENST00000470363 FHOD1Q9Y613 1164 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 SDK1Q7Z5N4 2213 aa12.2□□□□□ -0.46
HLA-C-206ENST00000470363 A8MXQ7 604 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 AXIN1O15169 862 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 PMM2O15305 246 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 FOXD2O60548 495 aaPredicted RBP12.19□□□□□ -0.46
HLA-C-206ENST00000470363 CLSTN1O94985 981 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 NFATC1O95644 943 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 CYP17A1P05093 508 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 ANXA13P27216 316 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 PGFP49763 221 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 LIMK1P53667 647 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 AP3M2P53677 418 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 TNNC1P63316 161 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 NR1H3Q13133 447 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 TRPC3Q13507 836 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 NCOA4Q13772 614 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 DMC1Q14565 340 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 CEP68Q76N32 757 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 RASSF3Q86WH2 238 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 SFTPA1Q8IWL2 248 aa12.19□□□□□ -0.46
HLA-C-206ENST00000470363 NUP93Q8N1F7 819 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms