RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ZNF232Q9UNY5 417 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 MRPL42Q9Y6G3 142 aaKnown RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 SF3B1O75533 1304 aaKnown RBP eCLIP8.64□□□□□ -1.031e-6■■■■■ 112.6
BRCA1-208ENST00000468300 CLCN6P51797 869 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 TUBB4BP68371 445 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 SEC14L1Q92503 715 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-208ENST00000468300 IGSF21Q96ID5 467 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 NPY6RQ99463 290 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 COLEC11Q9BWP8 271 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 ULBP1Q9BZM6 244 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 PNPLA8Q9NP80 782 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 ASNSD1Q9NWL6 643 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 CXXC1Q9P0U4 656 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-208ENST00000468300 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 hCG_1818297A0A087WSY0 165 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 KLHL33A6NCF5 533 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 USP17L7P0C7H9 530 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 KRT10P13645 584 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 RAG1P15918 1043 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 MATKP42679 507 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
BRCA1-208ENST00000468300 CA9Q16790 459 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 PRSS55Q6UWB4 352 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-208ENST00000468300 SPOCD1Q6ZMY3 1216 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 RNF19BQ6ZMZ0 732 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 KLHL7Q8IXQ5 586 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 DEFB106AQ8N104 65 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 THEM5Q8N1Q8 247 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 FAM172AQ8WUF8 416 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 BADQ92934 168 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 TBCBQ99426 244 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 PLEKHA4Q9H4M7 779 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 GDF3Q9NR23 364 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 CHCHD3Q9NX63 227 aaKnown RBP8.63□□□□□ -1.03
BRCA1-208ENST00000468300 MTMR10Q9NXD2 777 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 AMACRQ9UHK6 382 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 NAALADL1Q9UQQ1 740 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 NEU2Q9Y3R4 380 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 TP73O15350 636 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 TRAPPC3O43617 180 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 KIF1CO43896 1103 aaKnown RBP8.63□□□□□ -1.03
BRCA1-208ENST00000468300 DAB1O75553 588 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 KDELR1P24390 212 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 HTRA4P83105 476 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-208ENST00000468300 ATP11AP98196 1134 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 C4orf46Q504U0 113 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 OTOP2Q7RTS6 562 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 CEP57Q86XR8 500 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 RCOR2Q8IZ40 523 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 SLC39A11Q8N1S5 342 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 TMEM199Q8N511 208 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 HEMGNQ9BXL5 484 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 LRRC19Q9H756 370 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 ZWILCHQ9H900 591 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 CNGB3Q9NQW8 809 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 OSER1Q9NX31 292 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 IL37Q9NZH6 218 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 PCSK1NQ9UHG2 260 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 GBF1Q92538 1859 aa8.63□□□□□ -1.03
BRCA1-208ENST00000468300 CCDC188H7C350 402 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 HSF2BPO75031 334 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 BAIAP3O94812 1187 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 TCF3P15923 654 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 USP46P62068 366 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 YWHAZP63104 245 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CDO1Q16878 200 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CTXN3Q4LDR2 81 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 GLE1Q53GS7 698 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 KCNT2Q6UVM3 1135 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SCD5Q86SK9 330 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CCDC185Q8N715 623 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 OSBPL8Q9BZF1 889 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 DMAP1Q9NPF5 467 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 TMPRSS4Q9NRS4 437 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 PCYOX1Q9UHG3 505 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 PHF2O75151 1096 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SOAT2O75908 522 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 ZBED1O96006 694 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 IGLV3-25P01717 112 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 GJC1P36383 396 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CD151P48509 253 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SLC5A3P53794 718 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CCDC15Q0P6D6 951 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 IFT88Q13099 833 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 MAPRE1Q15691 268 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SLC25A52Q3SY17 297 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 EFHC1Q5JVL4 640 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 TMEM240Q5SV17 173 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SEL1L2Q5TEA6 688 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SLC8B1Q6J4K2 584 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 FAM117BQ6P1L5 589 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CCNI2Q6ZMN8 369 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 ZNF365Q70YC5 407 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CMTR2Q8IYT2 770 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 COLGALT1Q8NBJ5 622 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 ATAD1Q8NBU5 361 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 ATG4AQ8WYN0 398 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 PGLYRP2Q96PD5 576 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 TTPALQ9BTX7 342 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms