RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 SLC14A1Q13336 389 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 NPY5RQ15761 445 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 RUSC1-AS1Q66K80 236 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 PPP4R4Q6NUP7 873 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 ZDHHC17Q8IUH5 632 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 YAF2Q8IY57 180 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 C12orf76Q8N812 135 aaPredicted RBP6.33□□□□□ -1.4
SLF1-203ENST00000466957 VPS50Q96JG6 964 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 POT1Q9NUX5 634 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 L1RE1Q9UN81 338 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 SQORQ9Y6N5 450 aa6.33□□□□□ -1.4
SLF1-203ENST00000466957 AQP7P3A6NL99 342 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 FYB1O15117 783 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 PRPF3O43395 683 aaKnown RBP6.32□□□□□ -1.4
SLF1-203ENST00000466957 FRS3O43559 492 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 TLR2O60603 784 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 SNX2O60749 519 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 MAP4K4O95819 1239 aaPredicted RBP6.32□□□□□ -1.4
SLF1-203ENST00000466957 ATF7P17544 494 aaPredicted RBP6.32□□□□□ -1.4
SLF1-203ENST00000466957 TACR3P29371 465 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 CACNB3P54284 484 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 YPEL5P62699 121 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 TXNL4AP83876 142 aaKnown RBP6.32□□□□□ -1.4
SLF1-203ENST00000466957 ST3GAL2Q16842 350 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 RAVER1Q8IY67 606 aaKnown RBP6.32□□□□□ -1.4
SLF1-203ENST00000466957 METTL25Q8N6Q8 603 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 VCPIP1Q96JH7 1222 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 ZNF668Q96K58 619 aaPredicted RBP6.32□□□□□ -1.4
SLF1-203ENST00000466957 HIST1H2AAQ96QV6 131 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 LRRC27Q9C0I9 530 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 DHX36Q9H2U1 1008 aaKnown RBP6.32□□□□□ -1.4
SLF1-203ENST00000466957 HEY2Q9UBP5 337 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 STEAP1Q9UHE8 339 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 TTC3P53804 2025 aa6.32□□□□□ -1.4
SLF1-203ENST00000466957 FAM90A10PA6NDY2 464 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 A8MVJ9 347 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 TXNP10599 105 aaKnown RBP6.31□□□□□ -1.4
SLF1-203ENST00000466957 ADRA1DP25100 572 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 HTRA4P83105 476 aaPredicted RBP6.31□□□□□ -1.4
SLF1-203ENST00000466957 CFHR1Q03591 330 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 KCNAB1Q14722 419 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 TWIST1Q15672 202 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 PFKFB3Q16875 520 aaPredicted RBP6.31□□□□□ -1.4
SLF1-203ENST00000466957 SLC9C1Q4G0N8 1177 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 CLEC9AQ6UXN8 241 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 CCDC149Q6ZUS6 474 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 P3H2Q8IVL5 708 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.31□□□□□ -1.4
SLF1-203ENST00000466957 PNPLA1Q8N8W4 532 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 LRTOMTQ8WZ04 291 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 HIC2Q96JB3 615 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 ZNF287Q9HBT7 754 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 COL20A1Q9P218 1284 aa6.31□□□□□ -1.4
SLF1-203ENST00000466957 SCGB1D2O95969 90 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 THBS4P35443 961 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 EIF4A1P60842 406 aaKnown RBP6.3□□□□□ -1.4
SLF1-203ENST00000466957 FMO1Q01740 532 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 KPNB1Q14974 876 aaKnown RBP6.3□□□□□ -1.4
SLF1-203ENST00000466957 FAM102BQ5T8I3 360 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 RNF220Q5VTB9 566 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 PIM3Q86V86 326 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 FAM71DQ8N9W8 422 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 ZNF548Q8NEK5 533 aaPredicted RBP6.3□□□□□ -1.4
SLF1-203ENST00000466957 EDC3Q96F86 508 aaKnown RBP6.3□□□□□ -1.4
SLF1-203ENST00000466957 CHST8Q9H2A9 424 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 FAM83DQ9H4H8 585 aa6.3□□□□□ -1.4
SLF1-203ENST00000466957 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
SLF1-203ENST00000466957 THRAP3Q9Y2W1 955 aaKnown RBP6.3□□□□□ -1.4
SLF1-203ENST00000466957 CCDC180Q9P1Z9 1646 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 CD8B2A6NJW9 211 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 A6NNZ2 444 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 CA12O43570 354 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 INMTO95050 263 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 CBSLP0DN79 551 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 CTSAP10619 480 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 PSG1P11464 419 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 IL1R1P14778 569 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 CCKBRP32239 447 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 CBSP35520 551 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 ME1P48163 572 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 CARSP49589 748 aaKnown RBP6.29□□□□□ -1.4
SLF1-203ENST00000466957 CRELD2Q6UXH1 353 aaPredicted RBP6.29□□□□□ -1.4
SLF1-203ENST00000466957 DEF8Q6ZN54 512 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 PIP4P1Q86T03 277 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
SLF1-203ENST00000466957 ARFGAP1Q8N6T3 406 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 IPCEF1Q8WWN9 437 aaPredicted RBP6.29□□□□□ -1.4
SLF1-203ENST00000466957 WASF1Q92558 559 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 ARL8BQ9NVJ2 186 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 DNAJB11Q9UBS4 358 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 ZNF580Q9UK33 172 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 HS3ST3B1Q9Y662 390 aa6.29□□□□□ -1.4
SLF1-203ENST00000466957 MGEA5O60502 916 aa6.28□□□□□ -1.4
SLF1-203ENST00000466957 OAZ2O95190 189 aa6.28□□□□□ -1.4
SLF1-203ENST00000466957 CPA2P48052 419 aa6.28□□□□□ -1.4
SLF1-203ENST00000466957 GPC5P78333 572 aa6.28□□□□□ -1.4
SLF1-203ENST00000466957 STIM1Q13586 685 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms