RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CADM4Q8NFZ8 388 aa10.09□□□□□ -0.79
APP-213ENST00000464867 TRMT2BQ96GJ1 504 aaKnown RBP10.09□□□□□ -0.79
APP-213ENST00000464867 MTMR9Q96QG7 549 aa10.09□□□□□ -0.79
APP-213ENST00000464867 SLC22A12Q96S37 553 aa10.09□□□□□ -0.79
APP-213ENST00000464867 PLEKHA5Q9HAU0 1116 aa10.09□□□□□ -0.79
APP-213ENST00000464867 CPNE5Q9HCH3 593 aa10.09□□□□□ -0.79
APP-213ENST00000464867 PTPRHQ9HD43 1115 aa10.09□□□□□ -0.79
APP-213ENST00000464867 GMIPQ9P107 970 aa10.09□□□□□ -0.79
APP-213ENST00000464867 ANAPC1Q9H1A4 1944 aa10.08□□□□□ -0.8
APP-213ENST00000464867 BTBD18B2RXH4 712 aa10.08□□□□□ -0.8
APP-213ENST00000464867 RFPL3O75679 317 aa10.08□□□□□ -0.8
APP-213ENST00000464867 ADH5P11766 374 aa10.08□□□□□ -0.8
APP-213ENST00000464867 TNFSF9P41273 254 aa10.08□□□□□ -0.8
APP-213ENST00000464867 WASP42768 502 aa10.08□□□□□ -0.8
APP-213ENST00000464867 MATR3P43243 847 aaKnown RBP eCLIP10.08□□□□□ -0.8
APP-213ENST00000464867 CCT8P50990 548 aa10.08□□□□□ -0.8
APP-213ENST00000464867 AFF3P51826 1226 aaKnown RBP10.08□□□□□ -0.8
APP-213ENST00000464867 PCBP4P57723 403 aaKnown RBP10.08□□□□□ -0.8
APP-213ENST00000464867 ATP2C1P98194 919 aaPredicted RBP10.08□□□□□ -0.8
APP-213ENST00000464867 SPAG1Q07617 926 aa10.08□□□□□ -0.8
APP-213ENST00000464867 NFATC3Q12968 1075 aa10.08□□□□□ -0.8
APP-213ENST00000464867 TLR1Q15399 786 aa10.08□□□□□ -0.8
APP-213ENST00000464867 CALCRLQ16602 461 aa10.08□□□□□ -0.8
APP-213ENST00000464867 NFE2Q16621 373 aaPredicted RBP10.08□□□□□ -0.8
APP-213ENST00000464867 GAB4Q2WGN9 574 aa10.08□□□□□ -0.8
APP-213ENST00000464867 ZC2HC1CQ53FD0 456 aaPredicted RBP10.08□□□□□ -0.8
APP-213ENST00000464867 ATG14Q6ZNE5 492 aa10.08□□□□□ -0.8
APP-213ENST00000464867 Q6ZUG5 572 aa10.08□□□□□ -0.8
APP-213ENST00000464867 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
APP-213ENST00000464867 BRF1Q92994 677 aa10.08□□□□□ -0.8
APP-213ENST00000464867 TOE1Q96GM8 510 aaKnown RBP10.08□□□□□ -0.8
APP-213ENST00000464867 POM121Q96HA1 1249 aa10.08□□□□□ -0.8
APP-213ENST00000464867 NAF1Q96HR8 494 aaKnown RBP10.08□□□□□ -0.8
APP-213ENST00000464867 TARS2Q9BW92 718 aaKnown RBP10.08□□□□□ -0.8
APP-213ENST00000464867 GPR174Q9BXC1 333 aa10.08□□□□□ -0.8
APP-213ENST00000464867 TUFT1Q9NNX1 390 aa10.08□□□□□ -0.8
APP-213ENST00000464867 KCNK4Q9NYG8 393 aa10.08□□□□□ -0.8
APP-213ENST00000464867 DEC1Q9P2X7 70 aa10.08□□□□□ -0.8
APP-213ENST00000464867 PAXBP1Q9Y5B6 917 aa10.08□□□□□ -0.8
APP-213ENST00000464867 PCDHB6Q9Y5E3 794 aa10.08□□□□□ -0.8
APP-213ENST00000464867 TCHHQ07283 1943 aa10.07□□□□□ -0.8
APP-213ENST00000464867 TMEM131Q92545 1883 aa10.07□□□□□ -0.8
APP-213ENST00000464867 A0A1B0GVT2 93 aa10.07□□□□□ -0.8
APP-213ENST00000464867 A0A1W2PQF6 199 aa10.07□□□□□ -0.8
APP-213ENST00000464867 E2F8A0AVK6 867 aa10.07□□□□□ -0.8
APP-213ENST00000464867 LEFTY2O00292 366 aa10.07□□□□□ -0.8
APP-213ENST00000464867 CPLX1O14810 134 aa10.07□□□□□ -0.8
APP-213ENST00000464867 PCDHGA12O60330 932 aa10.07□□□□□ -0.8
APP-213ENST00000464867 PFKLP17858 780 aa10.07□□□□□ -0.8
APP-213ENST00000464867 XBP1P17861 261 aa10.07□□□□□ -0.8
APP-213ENST00000464867 MX2P20592 715 aa10.07□□□□□ -0.8
APP-213ENST00000464867 MSX1P28360 303 aa10.07□□□□□ -0.8
APP-213ENST00000464867 OXTRP30559 389 aa10.07□□□□□ -0.8
APP-213ENST00000464867 TXKP42681 527 aa10.07□□□□□ -0.8
APP-213ENST00000464867 GDF10P55107 478 aa10.07□□□□□ -0.8
APP-213ENST00000464867 MARSP56192 900 aaKnown RBP10.07□□□□□ -0.8
APP-213ENST00000464867 TSPY1Q01534 308 aa10.07□□□□□ -0.8
APP-213ENST00000464867 GAD2Q05329 585 aa10.07□□□□□ -0.8
APP-213ENST00000464867 PPP2R3AQ06190 1150 aa10.07□□□□□ -0.8
APP-213ENST00000464867 STRN3Q13033 797 aa10.07□□□□□ -0.8
APP-213ENST00000464867 NOLC1Q14978 699 aaKnown RBP eCLIP10.07□□□□□ -0.81e-6■□□□□ 10.2
APP-213ENST00000464867 C10orf76Q5T2E6 689 aa10.07□□□□□ -0.8
APP-213ENST00000464867 HES3Q5TGS1 186 aa10.07□□□□□ -0.8
APP-213ENST00000464867 DCAF12L1Q5VU92 463 aa10.07□□□□□ -0.8
APP-213ENST00000464867 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
APP-213ENST00000464867 USP49Q70CQ1 688 aa10.07□□□□□ -0.8
APP-213ENST00000464867 ERICH1Q86X53 443 aa10.07□□□□□ -0.8
APP-213ENST00000464867 LRRC15Q8TF66 581 aa10.07□□□□□ -0.8
APP-213ENST00000464867 TTC9Q92623 222 aa10.07□□□□□ -0.8
APP-213ENST00000464867 MYRFLQ96LU7 910 aa10.07□□□□□ -0.8
APP-213ENST00000464867 RUBCNLQ9H714 662 aa10.07□□□□□ -0.8
APP-213ENST00000464867 GCNT4Q9P109 453 aa10.07□□□□□ -0.8
APP-213ENST00000464867 EIF2B4Q9UI10 523 aaKnown RBP10.07□□□□□ -0.8
APP-213ENST00000464867 C2orf78A6NCI8 922 aa10.06□□□□□ -0.8
APP-213ENST00000464867 LAD1O00515 517 aa10.06□□□□□ -0.8
APP-213ENST00000464867 ENC1O14682 589 aa10.06□□□□□ -0.8
APP-213ENST00000464867 DFNA5O60443 496 aa10.06□□□□□ -0.8
APP-213ENST00000464867 NOL4O94818 638 aa10.06□□□□□ -0.8
APP-213ENST00000464867 LDOC1O95751 146 aaPredicted RBP10.06□□□□□ -0.8
APP-213ENST00000464867 IGHDP01880 384 aa10.06□□□□□ -0.8
APP-213ENST00000464867 CYP11A1P05108 521 aa10.06□□□□□ -0.8
APP-213ENST00000464867 CLTAP09496 248 aa10.06□□□□□ -0.8
APP-213ENST00000464867 CXCL8P10145 99 aa10.06□□□□□ -0.8
APP-213ENST00000464867 PROZP22891 400 aa10.06□□□□□ -0.8
APP-213ENST00000464867 CSNK1EP49674 416 aaKnown RBP10.06□□□□□ -0.8
APP-213ENST00000464867 CCT2P78371 535 aaKnown RBP10.06□□□□□ -0.8
APP-213ENST00000464867 BNC1Q01954 994 aa10.06□□□□□ -0.8
APP-213ENST00000464867 MESP2Q0VG99 397 aa10.06□□□□□ -0.8
APP-213ENST00000464867 DDR2Q16832 855 aa10.06□□□□□ -0.8
APP-213ENST00000464867 KIF19Q2TAC6 998 aa10.06□□□□□ -0.8
APP-213ENST00000464867 SEZ6Q53EL9 994 aa10.06□□□□□ -0.8
APP-213ENST00000464867 RHBDF2Q6PJF5 856 aa10.06□□□□□ -0.8
APP-213ENST00000464867 LRRTM3Q86VH5 581 aa10.06□□□□□ -0.8
APP-213ENST00000464867 C12orf40Q86WS4 652 aa10.06□□□□□ -0.8
APP-213ENST00000464867 STKLD1Q8NE28 680 aa10.06□□□□□ -0.8
APP-213ENST00000464867 IGSF8Q969P0 613 aa10.06□□□□□ -0.8
APP-213ENST00000464867 ERLEC1Q96DZ1 483 aa10.06□□□□□ -0.8
APP-213ENST00000464867 MRGPRX1Q96LB2 322 aa10.06□□□□□ -0.8
APP-213ENST00000464867 ZNF578Q96N58 590 aaPredicted RBP10.06□□□□□ -0.8
APP-213ENST00000464867 TSPAN18Q96SJ8 248 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms