RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	COL20A1	Q9P218	1284 aa		5.11	□□□□□ -1.59
UBA3-204	ENST00000461522	ARAP1	Q96P48	1450 aa		5.11	□□□□□ -1.59
UBA3-204	ENST00000461522	SAMD9	Q5K651	1589 aa		5.11	□□□□□ -1.59
UBA3-204	ENST00000461522	PLEKHD1	A6NEE1	506 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	DSCR3	O14972	297 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	HGF	P14210	728 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	IL1R1	P14778	569 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	CREB1	P16220	341 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	MTHFS	P49914	203 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	COPB1	P53618	953 aa	Known RBP	5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	CACNB3	P54284	484 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	RPS16	P62249	146 aa	Known RBP	5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	FMO1	Q01740	532 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	LARS2	Q15031	903 aa	Known RBP	5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	RABEP1	Q15276	862 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	ARHGAP29	Q52LW3	1261 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	TMEM63B	Q5T3F8	832 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	PXDC1	Q5TGL8	231 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	CASKIN1	Q8WXD9	1431 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	LRTOMT	Q8WZ04	291 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	COQ8B	Q96D53	544 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	KDM5B	Q9UGL1	1544 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	EID1	Q9Y6B2	187 aa		5.1	□□□□□ -1.59
UBA3-204	ENST00000461522	KIAA0556	O60303	1618 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	ABCC2	Q92887	1545 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522		H3BNC9	293 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	AGPS	O00116	658 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	TMPRSS11D	O60235	418 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	PIAS2	O75928	621 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	HRG	P04196	525 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	TXN	P10599	105 aa	Known RBP	5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	MYF5	P13349	255 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	ATF7	P17544	494 aa	Predicted RBP	5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	ACVR2A	P27037	513 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	GATM	P50440	423 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	PGD	P52209	483 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	SLC29A2	Q14542	456 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	POLD3	Q15054	466 aa	Predicted RBP	5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	AWAT1	Q58HT5	328 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	RNF220	Q5VTB9	566 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	TMEM65	Q6PI78	240 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	MAFA	Q8NHW3	353 aa	Predicted RBP	5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	HMCES	Q96FZ2	354 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	APIP	Q96GX9	242 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	LRRC27	Q9C0I9	530 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	TRNAU1AP	Q9NX07	287 aa	Known RBP	5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	MGAT4C	Q9UBM8	478 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	DKK4	Q9UBT3	224 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	DDX20	Q9UHI6	824 aa	Known RBP	5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	HDAC9	Q9UKV0	1011 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	AFG3L2	Q9Y4W6	797 aa		5.09	□□□□□ -1.59
UBA3-204	ENST00000461522	MAP3K1	Q13233	1512 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	FHOD3	Q2V2M9	1422 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	VPS8	Q8N3P4	1428 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	EXOC5	O00471	708 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	FGB	P02675	491 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	S100B	P04271	92 aa	Predicted RBP	5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	PARP1	P09874	1014 aa	Known RBP	5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	ZKSCAN1	P17029	563 aa	Predicted RBP	5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	MCM5	P33992	734 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	CPT1A	P50416	773 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	ITGA8	P53708	1063 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	AWAT2	Q6E213	333 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	CHST15	Q7LFX5	561 aa	Predicted RBP	5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	BHLHA9	Q7RTU4	235 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	SRGAP1	Q7Z6B7	1085 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	TECPR1	Q7Z6L1	1165 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	SESTD1	Q86VW0	696 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	NANOGP1	Q8N7R0	232 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	FAM156A	Q8NDB6	213 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	C16orf52	Q8NHV5	167 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	OSR1	Q8TAX0	266 aa	Predicted RBP	5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	MAP4K1	Q92918	833 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	ZNF668	Q96K58	619 aa	Predicted RBP	5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	MSLNL	Q96KJ4	702 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	CHST8	Q9H2A9	424 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	FAM83D	Q9H4H8	585 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	MID2	Q9UJV3	735 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	RIMKLB	Q9ULI2	386 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	CTTNBP2	Q8WZ74	1663 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	RIMBP3C	A6NJZ7	1639 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	RIMBP3B	A6NNM3	1639 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	RIMBP3	Q9UFD9	1639 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	ABCA8	O94911	1581 aa		5.08	□□□□□ -1.6
UBA3-204	ENST00000461522	ATP10B	O94823	1461 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	PLB1	Q6P1J6	1458 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	AQP7P3	A6NL99	342 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522		A8MVJ9	347 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	RAB27B	O00194	218 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	ZBED1	O96006	694 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	CCT4	P50991	539 aa	Known RBP	5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	PLCD1	P51178	756 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	GHRHR	Q02643	423 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	CFHR3	Q02985	330 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	SEC23B	Q15437	767 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	DCDC5	Q6ZRR9	648 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	MRPL10	Q7Z7H8	261 aa	Known RBP	5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	LIX1L	Q8IVB5	337 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	YAF2	Q8IY57	180 aa		5.07	□□□□□ -1.6
UBA3-204	ENST00000461522	METTL25	Q8N6Q8	603 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms