RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 KIAA1549LQ6ZVL6 1849 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 SCAMP3O14828 347 aaKnown RBP18.79■□□□□ 0.6
MSH6-207ENST00000456246 XPO1O14980 1071 aaKnown RBP18.79■□□□□ 0.6
MSH6-207ENST00000456246 HRO43593 1189 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 APBB3O95704 486 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 PAEPP09466 180 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 CCDC192P0DO97 292 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 IRF1P10914 325 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 GRIA2P42262 883 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 PGFP49763 221 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 BST2Q10589 180 aaKnown RBP18.79■□□□□ 0.6
MSH6-207ENST00000456246 DMC1Q14565 340 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 RAB41Q5JT25 222 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 C10orf120Q5SQS8 335 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 CEP68Q76N32 757 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.79■□□□□ 0.6
MSH6-207ENST00000456246 PIGZQ86VD9 579 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 TRIM59Q8IWR1 403 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 DCLK2Q8N568 766 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 USP33Q8TEY7 942 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 ARHGEF4Q9NR80 690 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 OSER1Q9NX31 292 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 TSPAN16Q9UKR8 245 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 FRYLO94915 3013 aa18.79■□□□□ 0.6
MSH6-207ENST00000456246 A0A0A0MRY4 1105 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 K7EQS6 105 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 KAT7O95251 611 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 TBX18O95935 607 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 SETSIPP0DME0 302 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 CD19P15391 556 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 ANP32AP39687 249 aaKnown RBP18.78■□□□□ 0.6
MSH6-207ENST00000456246 ID4P47928 161 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 COG7P83436 770 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 GCNT1Q02742 428 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 LRMPQ12912 555 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 STILQ15468 1287 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 GOLGA7BQ2TAP0 167 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 SCD5Q86SK9 330 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 ETFBKMTQ8IXQ9 262 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 PPM1KQ8N3J5 372 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 UBR7Q8N806 425 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 GAB3Q8WWW8 586 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 RWDD2AQ9UIY3 292 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 ZNF510Q9Y2H8 683 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.78■□□□□ 0.6
MSH6-207ENST00000456246 CEP250Q9BV73 2442 aa18.78■□□□□ 0.6
MSH6-207ENST00000456246 AXIN1O15169 862 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 FOXD2O60548 495 aaPredicted RBP18.77■□□□□ 0.6
MSH6-207ENST00000456246 RPP40O75818 363 aaKnown RBP18.77■□□□□ 0.6
MSH6-207ENST00000456246 AFPP02771 609 aaKnown RBP18.77■□□□□ 0.6
MSH6-207ENST00000456246 SDHBP21912 280 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 TNFRSF4P43489 277 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 STX17P56962 302 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 LMNB2Q03252 620 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 PM20D1Q6GTS8 502 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 TTC30AQ86WT1 665 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 KCNV2Q8TDN2 545 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 SRRTQ9BXP5 876 aaKnown RBP18.77■□□□□ 0.6
MSH6-207ENST00000456246 DCLK3Q9C098 648 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 LRRC4Q9HBW1 653 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 MARK1Q9P0L2 795 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 WDR35Q9P2L0 1181 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 DEC1Q9P2X7 70 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 EBF1Q9UH73 591 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 STRIP2Q9ULQ0 834 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 MMP17Q9ULZ9 603 aa18.77■□□□□ 0.6
MSH6-207ENST00000456246 SPAG17Q6Q759 2223 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 O00370 1275 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 GREM1O60565 184 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 ZBED1O96006 694 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 TKTL1P51854 596 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 YWHAGP61981 247 aaKnown RBP eCLIP18.76■□□□□ 0.59
MSH6-207ENST00000456246 PDE4CQ08493 712 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 KCNH2Q12809 1159 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 ANO4Q32M45 955 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 TMEM270Q6UE05 265 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 LCLAT1Q6UWP7 414 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 CACNA2D4Q7Z3S7 1137 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 C12orf40Q86WS4 652 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 TSTD1Q8NFU3 115 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 LMO3Q8TAP4 145 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 LOXL4Q96JB6 756 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 XPO6Q96QU8 1125 aaKnown RBP18.76■□□□□ 0.59
MSH6-207ENST00000456246 HHIPQ96QV1 700 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 OLA1Q9NTK5 396 aaKnown RBP18.76■□□□□ 0.59
MSH6-207ENST00000456246 PCDHB4Q9Y5E5 795 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 MYOFQ9NZM1 2061 aa18.76■□□□□ 0.59
MSH6-207ENST00000456246 PRR5-ARHGAP8B1AHC4 643 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 TULP3O75386 442 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 SLC6A11P48066 632 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 DGKEP52429 567 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 SEC13P55735 322 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 ARHGAP8P85298 464 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 FOXK2Q01167 660 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
MSH6-207ENST00000456246 LPAL2Q16609 132 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 C2orf27AQ580R0 203 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 EOGTQ5NDL2 527 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 Q6ZNB5 142 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms