RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 SEL1L2Q5TEA6 688 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 BSPRYQ5W0U4 402 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 MFSD7Q6UXD7 560 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 SPOCD1Q6ZMY3 1216 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 VPS52Q8N1B4 723 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 NUP93Q8N1F7 819 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 PRELID2Q8N945 189 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 KLHL23Q8NBE8 558 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 STKLD1Q8NE28 680 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 ZNF461Q8TAF7 563 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 FAM71BQ8TC56 605 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 FAM172AQ8WUF8 416 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 UBXN4Q92575 508 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 DPF3Q92784 378 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 RNF25Q96BH1 459 aaPredicted RBP6.27□□□□□ -1.41
SDC4P-201ENST00000453285 FAM149B1Q96BN6 582 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 ACSF2Q96CM8 615 aaPredicted RBP6.27□□□□□ -1.41
SDC4P-201ENST00000453285 PGAP3Q96FM1 320 aaPredicted RBP6.27□□□□□ -1.41
SDC4P-201ENST00000453285 SPATA17Q96L03 361 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 SLITRK1Q96PX8 696 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 NCAPGQ9BPX3 1015 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 LRRC1Q9BTT6 524 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 AP1M1Q9BXS5 423 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 MAGEB5Q9BZ81 275 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 OSBPL8Q9BZF1 889 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 ZBP1Q9H171 429 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 ANKZF1Q9H8Y5 726 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 ZWILCHQ9H900 591 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 NMUR1Q9HB89 426 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 POPDC2Q9HBU9 364 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 RXFP1Q9HBX9 757 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 NGRNQ9NPE2 291 aaKnown RBP6.27□□□□□ -1.41
SDC4P-201ENST00000453285 AAASQ9NRG9 546 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 KLHL11Q9NVR0 708 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 COMMD8Q9NX08 183 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 DDX56Q9NY93 547 aaKnown RBP6.27□□□□□ -1.41
SDC4P-201ENST00000453285 FNIP2Q9P278 1114 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 AFF4Q9UHB7 1163 aaKnown RBP6.27□□□□□ -1.41
SDC4P-201ENST00000453285 PCSK1NQ9UHG2 260 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 SCML2Q9UQR0 700 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.27□□□□□ -1.41
SDC4P-201ENST00000453285 PCDHB12Q9Y5F1 795 aa6.27□□□□□ -1.41
SDC4P-201ENST00000453285 LAMA2P24043 3122 aaKnown RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 NYNRINQ9P2P1 1898 aaKnown RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 hCG_1818297A0A087WSY0 165 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 LINC01553A4QN01 128 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 SLC38A8A6NNN8 435 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 GRXCR1A8MXD5 290 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 CCDC188H7C350 402 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 I6L893 689 aaPredicted RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 M0QYT0 321 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 KRIT1O00522 736 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 DYNC1I1O14576 645 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 MDM4O15151 490 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 TLL1O43897 1013 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 IGLV3-25P01717 112 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 KRT1P04264 644 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 CD48P09326 243 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 CTSAP10619 480 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 RALAP11233 206 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 KRT10P13645 584 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 ATF2P15336 505 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 ATF6P18850 670 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 IL4RP24394 825 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 DNAJB1P25685 340 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 GJC1P36383 396 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 BMPR1AP36894 532 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 SULT1E1P49888 294 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 ERVFC1P60507 584 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 YWHAGP61981 247 aaKnown RBP eCLIP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 RPL10AP62906 217 aaKnown RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 MTMR3Q13615 1198 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 LLGL1Q15334 1064 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 SHHQ15465 462 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 CLUL1Q15846 466 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 PPP2R5EQ16537 467 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 CA9Q16790 459 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 SMTNL2Q2TAL5 461 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 MGAT5BQ3V5L5 792 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 BOLA3Q53S33 107 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 ZC3H12AQ5D1E8 599 aaKnown RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 ERMARDQ5T6L9 678 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 TPGS2Q68CL5 300 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 FAM109BQ6ICB4 259 aaPredicted RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 KIAA1841Q6NSI8 718 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 SCYL2Q6P3W7 929 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 SPRED2Q7Z698 418 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 ADAT2Q7Z6V5 191 aaKnown RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 GPR161Q8N6U8 529 aaKnown RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 SPPL3Q8TCT6 385 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 GPR152Q8TDT2 470 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 HDAC7Q8WUI4 952 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 TEKT4Q8WW24 435 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 AUTS2Q8WXX7 1259 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 EDEM1Q92611 657 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 RBM41Q96IZ5 413 aaKnown RBP6.26□□□□□ -1.41
SDC4P-201ENST00000453285 CEP295NLQ96MC4 621 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 PNKPQ96T60 521 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 KRT12Q99456 494 aa6.26□□□□□ -1.41
SDC4P-201ENST00000453285 NAP1L3Q99457 506 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms