RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 OSER1Q9NX31 292 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 COL4A2P08572 1712 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 DMXL1Q9Y485 3027 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 ARNTLO00327 626 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 TLR5O60602 858 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 ZBED1O96006 694 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 POLR2FP61218 127 aaKnown RBP20.96■□□□□ 0.95
COL9A3-202ENST00000452372 ZXDBP98169 803 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 ZNF77Q15935 545 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 FILIP1LQ4L180 1135 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 DENND1BQ6P3S1 775 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 SLC47A2Q86VL8 602 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 SCML4Q8N228 414 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 NEK11Q8NG66 645 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 RIN3Q8TB24 985 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 SH3RF2Q8TEC5 729 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 PCMTD1Q96MG8 357 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-202ENST00000452372 ULBP1Q9BZM6 244 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 SEMA4AQ9H3S1 761 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.96■□□□□ 0.95
COL9A3-202ENST00000452372 CLIC5Q9NZA1 410 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 NAGPAQ9UK23 515 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 PCDHGC3Q9UN70 934 aa20.96■□□□□ 0.95
COL9A3-202ENST00000452372 KIF26AQ9ULI4 1882 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-202ENST00000452372 F8VZ95 297 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 LEFTY2O00292 366 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 EPHB6O15197 1021 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 TEX33O43247 280 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 GABBR2O75899 941 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 MBL2P11226 248 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-202ENST00000452372 RARGP13631 454 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 RPL34P49207 117 aaKnown RBP20.95■□□□□ 0.94
COL9A3-202ENST00000452372 RGS7P49802 495 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 ADIGQ0VDE8 80 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 USP4Q13107 963 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 MTF1Q14872 753 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 LRSAM1Q6UWE0 723 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 SIX6OS1Q8N1H7 587 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 ARHGAP18Q8N392 663 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 STK32AQ8WU08 396 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 ZFYVE19Q96K21 471 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 NELL2Q99435 816 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 FAM83CQ9BQN1 747 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 CNGB3Q9NQW8 809 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 GKN1Q9NS71 199 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 CPQQ9Y646 472 aa20.95■□□□□ 0.94
COL9A3-202ENST00000452372 TICRRQ7Z2Z1 1910 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 A0A1B0GTH6 734 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 GOLGA6L19H0YKK7 550 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 TBX18O95935 607 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 RALAP11233 206 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 LCP1P13796 627 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 ATP5C1P36542 298 aaKnown RBP20.94■□□□□ 0.94
COL9A3-202ENST00000452372 MLLT6P55198 1093 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-202ENST00000452372 CC2D1AQ6P1N0 951 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-202ENST00000452372 KLHDC10Q6PID8 442 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 ZNF852Q6ZMS4 543 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 KIAA1958Q8N8K9 716 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 NAP1L5Q96NT1 182 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-202ENST00000452372 NLRC4Q9NPP4 1024 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 SMPD4Q9NXE4 827 aa20.94■□□□□ 0.94
COL9A3-202ENST00000452372 CEP250Q9BV73 2442 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 LMNAP02545 664 aaKnown RBP20.93■□□□□ 0.94
COL9A3-202ENST00000452372 KRT9P35527 623 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 JAM2P57087 298 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 DAOAP59103 153 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 YWHAGP61981 247 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL9A3-202ENST00000452372 NR1I3Q14994 352 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 BHLHA9Q7RTU4 235 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 TADA2BQ86TJ2 420 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 DDX42Q86XP3 938 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL9A3-202ENST00000452372 CSGALNACT1Q8TDX6 532 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 NDRG1Q92597 394 aaKnown RBP20.93■□□□□ 0.94
COL9A3-202ENST00000452372 ZFRQ96KR1 1074 aaKnown RBP20.93■□□□□ 0.94
COL9A3-202ENST00000452372 CDK5RAP1Q96SZ6 601 aaKnown RBP20.93■□□□□ 0.94
COL9A3-202ENST00000452372 SLC4A5Q9BY07 1137 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 NACA2Q9H009 215 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 LHX5Q9H2C1 402 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 TSPY26PQ9H489 355 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 SPATA6Q9NWH7 488 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-202ENST00000452372 CYTH4Q9UIA0 394 aa20.93■□□□□ 0.94
COL9A3-202ENST00000452372 FBXO21O94952 628 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 SERPINC1P01008 464 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 CYP11B1P15538 503 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 ACADSBP45954 432 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 RPS9P46781 194 aaKnown RBP20.92■□□□□ 0.94
COL9A3-202ENST00000452372 PDGFRLQ15198 375 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 ZNF528Q3MIS6 628 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 TMEM110Q86TL2 294 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 WDTC1Q8N5D0 677 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 TTC16Q8NEE8 873 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 OSCP1Q8WVF1 389 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 IRGQQ8WZA9 623 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 NELL1Q92832 810 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 SPAG5Q96R06 1193 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 KLF16Q9BXK1 252 aaPredicted RBP20.92■□□□□ 0.94
COL9A3-202ENST00000452372 GTSE1Q9NYZ3 720 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 DNMT3LQ9UJW3 386 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 FBXO4Q9UKT5 387 aa20.92■□□□□ 0.94
COL9A3-202ENST00000452372 A0A1W2PQC6 194 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms