RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 LMO3Q8TAP4 145 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 WHAMMQ8TF30 809 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 IER2Q9BTL4 223 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 NT5C1AQ9BXI3 368 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 CYP3A43Q9HB55 503 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 GMIPQ9P107 970 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 SIK3Q9Y2K2 1263 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 MYOFQ9NZM1 2061 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 TRDMT1O14717 391 aaKnown RBP17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 TCF3P15923 654 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 PFKLP17858 780 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 TBXAS1P24557 533 aaPredicted RBP17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 PBX1P40424 430 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 MFAP3P55082 362 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 SLC7A9P82251 487 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 GRSF1Q12849 480 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 LRMPQ12912 555 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 PPP2R5DQ14738 602 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 TMEM196Q5HYL7 178 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 HEATR6Q6AI08 1181 aaKnown RBP17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 ENOSF1Q7L5Y1 443 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 PDZD8Q8NEN9 1154 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 TATDN2Q93075 761 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 ATP2A3Q93084 1043 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 CYFIP2Q96F07 1278 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 P2RY13Q9BPV8 354 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 CCSER2Q9H7U1 834 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 CFAP97Q9P2B7 532 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 APEX2Q9UBZ4 518 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 MYO16Q9Y6X6 1858 aa17.97■□□□□ 0.47
PRPF40A-204ENST00000450303 CHURC1-FNTBB4DL54 471 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 COCHO43405 550 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 LILRB5O75023 590 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 CILPO75339 1184 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 OLFM2O95897 454 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 FAM200BP0CF97 657 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 FNTBP49356 437 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 PGFP49763 221 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 YWHAEP62258 255 aaKnown RBP17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 AMPD2Q01433 879 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 FIGNQ5HY92 759 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 KLHDC7AQ5VTJ3 777 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 GPRIN1Q7Z2K8 1008 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 CACNA2D4Q7Z3S7 1137 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 TMC6Q7Z403 805 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 PPM1KQ8N3J5 372 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 HNRNPABQ99729 332 aaKnown RBP17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 EDEM3Q9BZQ6 932 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 CSNK1G1Q9HCP0 422 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 UBE2TQ9NPD8 197 aaPredicted RBP17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 FAM207AQ9NSI2 230 aaPredicted RBP17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 POLR3BQ9NW08 1133 aaPredicted RBP17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 IL37Q9NZH6 218 aa17.96■□□□□ 0.47
PRPF40A-204ENST00000450303 EP300Q09472 2414 aaPredicted RBP17.96■□□□□ 0.46
PRPF40A-204ENST00000450303 K7ESF4 209 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 ZNF500O60304 480 aaPredicted RBP17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 NRLP54845 237 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 NR1H3Q13133 447 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 HECTD3Q5T447 861 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 SMYD5Q6GMV2 418 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 CLEC20AQ6ZU45 233 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 SYNPOQ8N3V7 929 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 TTC39CQ8N584 583 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 ZNF397Q8NF99 534 aaPredicted RBP17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 OVCA2Q8WZ82 227 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 CD101Q93033 1021 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 HEXIM2Q96MH2 286 aaKnown RBP17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 ARID3AQ99856 593 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 FAM126AQ9BYI3 521 aaPredicted RBP17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 DNAI2Q9GZS0 605 aa17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 FAM124BQ9H5Z6 455 aaPredicted RBP17.95■□□□□ 0.46
PRPF40A-204ENST00000450303 RNF40O75150 1001 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 NFATC1O95644 943 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 UCHL3P15374 230 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 KLK7P49862 253 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 GCNT1Q02742 428 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 SRSF5Q13243 272 aaKnown RBP17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 LPAL2Q16609 132 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 PPP1R26Q5T8A7 1209 aaPredicted RBP17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 FMNL3Q8IVF7 1028 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 KIAA2013Q8IYS2 634 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 RUBCNQ92622 972 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 EZH1Q92800 747 aaPredicted RBP17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 SIX2Q9NPC8 291 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 CISHQ9NSE2 258 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 COMMD8Q9NX08 183 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 DNAJC12Q9UKB3 198 aa17.94■□□□□ 0.46
PRPF40A-204ENST00000450303 A0A1W2PQJ5 194 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 FAM92AA1XBS5 289 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 HHLA1C9JL84 531 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 ZDHHC11BP0C7U3 371 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 IRF1P10914 325 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 ACO1P21399 889 aaKnown RBP17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 DRD1P21728 446 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 PXNP49023 591 aaPredicted RBP17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 POLR2FP61218 127 aaKnown RBP17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 CUL2Q13617 745 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 SNX30Q5VWJ9 437 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 ARHGEF19Q8IW93 802 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms