RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 TWNKQ96RR1 684 aa17.53■□□□□ 0.4
SNHG17-207ENST00000449469 ETNK2Q9NVF9 386 aa17.53■□□□□ 0.4
SNHG17-207ENST00000449469 ZNF212Q9UDV6 495 aa17.53■□□□□ 0.4
SNHG17-207ENST00000449469 CDH8P55286 799 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 MMRN1Q13201 1228 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 NBPF20Q3BBV1 942 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 DNAL1Q4LDG9 190 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 KHDC1Q4VXA5 237 aaKnown RBP17.52■□□□□ 0.4
SNHG17-207ENST00000449469 EEF1DP3Q658K8 133 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 NPNTQ6UXI9 565 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 TIFABQ6ZNK6 161 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 IFNLR1Q8IU57 520 aaPredicted RBP17.52■□□□□ 0.4
SNHG17-207ENST00000449469 ZDHHC17Q8IUH5 632 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 PPFIBP2Q8ND30 876 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 SMC1BQ8NDV3 1235 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 GSDMBQ8TAX9 411 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 CXorf38Q8TB03 319 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 E2F7Q96AV8 911 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 HEXIM2Q96MH2 286 aaKnown RBP17.52■□□□□ 0.4
SNHG17-207ENST00000449469 NLRP4Q96MN2 994 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 SMARCAD1Q9H4L7 1026 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 STN1Q9H668 368 aaKnown RBP17.52■□□□□ 0.4
SNHG17-207ENST00000449469 XAB2Q9HCS7 855 aaKnown RBP17.52■□□□□ 0.4
SNHG17-207ENST00000449469 TAS2R1Q9NYW7 299 aa17.52■□□□□ 0.4
SNHG17-207ENST00000449469 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.39
SNHG17-207ENST00000449469 PSMG1O95456 288 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 CRHR1P34998 444 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 RCN1Q15293 331 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 C6orf163Q5TEZ5 329 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 TRIM68Q6AZZ1 485 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 ANO7Q6IWH7 933 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 SPATC1LQ9H0A9 340 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 VCXQ9H320 206 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 GBA2Q9HCG7 927 aaPredicted RBP17.51■□□□□ 0.39
SNHG17-207ENST00000449469 FBXO6Q9NRD1 293 aaPredicted RBP17.51■□□□□ 0.39
SNHG17-207ENST00000449469 C2CD2Q9Y426 696 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 LACTBL1A8MY62 500 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 H0Y3Z8 333 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 STAG3L1P0CL83 205 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 NR2C2P49116 596 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 OSTNP61366 133 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 TMPRSS15P98073 1019 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 JADE1Q6IE81 842 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 OR6B2Q6IFH4 312 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 DSTYKQ6XUX3 929 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 FAM183BPQ6ZVS7 135 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 CRLF3Q8IUI8 442 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 TAB3Q8N5C8 712 aaPredicted RBP17.51■□□□□ 0.39
SNHG17-207ENST00000449469 CEP120Q8N960 986 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 ACMSDQ8TDX5 336 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 HPDLQ96IR7 371 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 PRDM16Q9HAZ2 1276 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 ALG13Q9NP73 1137 aaKnown RBP17.51■□□□□ 0.39
SNHG17-207ENST00000449469 NMRK1Q9NWW6 199 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 DNAJB4Q9UDY4 337 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 ANGPTL2Q9UKU9 493 aa17.51■□□□□ 0.39
SNHG17-207ENST00000449469 ZSWIM8A7E2V4 1837 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 FAM159BA6NKW6 160 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 CAPN14A8MX76 684 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 GCATO75600 419 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 PIAS1O75925 651 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 TRMT5Q32P41 509 aaKnown RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 ACSBG2Q5FVE4 666 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 RFWD3Q6PCD5 774 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 KYAT3Q6YP21 454 aaKnown RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 CAND1Q86VP6 1230 aaKnown RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 NT5C1AQ9BXI3 368 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 C12orf65Q9H3J6 166 aaKnown RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 FAM96AQ9H5X1 160 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 PCDH18Q9HCL0 1135 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 HMGXB4Q9UGU5 601 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 SLC15A5A6NIM6 579 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 NFKBIEO00221 500 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 B4GALT5O43286 388 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 RFPL1O75677 317 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 CAPN15O75808 1086 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 ITGBL1O95965 494 aaPredicted RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 SDC4P31431 198 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 HIRAP54198 1017 aaPredicted RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 SARNPP82979 210 aaKnown RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 RBP5P82980 135 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 WASHC5Q12768 1159 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 NAB1Q13506 487 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 KPNB1Q14974 876 aaKnown RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 TMEM132DQ14C87 1099 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 LY6KQ17RY6 165 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 TEX44Q53QW1 395 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 SNX30Q5VWJ9 437 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 C1orf228Q6PIY5 440 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 LRRC74BQ6ZQY2 392 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 RINLQ6ZS11 566 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 NET1Q7Z628 596 aaPredicted RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 PRPF39Q86UA1 669 aaKnown RBP17.5■□□□□ 0.39
SNHG17-207ENST00000449469 SESTD1Q86VW0 696 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 PQLC3Q8N755 202 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.5■□□□□ 0.397e-6■□□□□ 9.2
SNHG17-207ENST00000449469 NMUR2Q9GZQ4 415 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 C1orf21Q9H246 121 aa17.5■□□□□ 0.39
SNHG17-207ENST00000449469 E5RJQ4 531 aa17.49■□□□□ 0.39
SNHG17-207ENST00000449469 FZD9O00144 591 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms