RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GPATCH2LQ9NWQ4 482 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF70Q9UC06 446 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ZNRF3Q9ULT6 936 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 TULP4Q9NRJ4 1543 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MAP2K7O14733 419 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ATP5BP06576 529 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ALOX15P16050 662 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ACO1P21399 889 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 SREBF1P36956 1147 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 NAMPTP43490 491 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ALDH5A1P51649 535 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 C1QBPQ07021 282 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 TMEM62Q0P6H9 643 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 CNTN1Q12860 1018 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ITGA9Q13797 1035 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 C16orf72Q14CZ0 275 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MGAT5BQ3V5L5 792 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 SPDYCQ5MJ68 293 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 CD302Q8IX05 232 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 CHST13Q8NET6 341 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 OSCP1Q8WVF1 389 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 APOPT1Q96IL0 206 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 TAAR1Q96RJ0 339 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 FAM192AQ9GZU8 254 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 GANQ9H2C0 597 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 GDF3Q9NR23 364 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 AP4E1Q9UPM8 1137 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MROH7Q68CQ1 1323 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 PDZK1P1A8MUH7 402 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CLOCKO15516 846 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF862O60290 1169 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NPTXRO95502 500 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PSMA3P25788 255 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 KRT20P35900 424 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ELK3P41970 407 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ANXA11P50995 505 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 SLC16A1P53985 500 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 TRAF2Q12933 501 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NTRK3Q16288 839 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SEZ6Q53EL9 994 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 C10orf120Q5SQS8 335 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 N4BP2L1Q5TBK1 243 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 TMC5Q6UXY8 1006 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ARHGAP22Q7Z5H3 698 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SLC22A9Q8IVM8 553 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 KRT78Q8N1N4 520 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ATG16L2Q8NAA4 619 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 TMEM237Q96Q45 408 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NRDE2Q9H7Z3 1164 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SESN1Q9Y6P5 492 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 KPNA4O00629 521 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 KCNQ2O43526 872 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 TBC1D12O60347 775 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 TRIM13O60858 407 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NTSR2O95665 410 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SLC25A27O95847 323 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 GP5P40197 560 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NCKAP1LP55160 1127 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CSHL1Q14406 222 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NT5DC1Q5TFE4 455 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SV2AQ7L0J3 742 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ACOT1Q86TX2 421 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PRCCQ92733 491 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 FAM120BQ96EK7 910 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 NSMCE2Q96MF7 247 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 RPRD1AQ96P16 312 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 APOL2Q9BQE5 337 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 BDH2Q9BUT1 245 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 AGXT2Q9BYV1 514 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NINJ2Q9NZG7 142 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CROTQ9UKG9 612 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ABCA6Q8N139 1617 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 C1orf232A0A0U1RR37 186 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 RRN3P2A6NIE6 340 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 NBNO60934 754 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 BAIAP3O94812 1187 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF682O95780 498 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 TPBGLP0DKB5 382 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ME2P23368 584 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PAX7P23759 505 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PSMB9P28065 219 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 POU1F1P28069 291 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SLC1A6P48664 564 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PRKAA2P54646 552 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 CSE1LP55060 971 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 IL5RAQ01344 420 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SEC23AQ15436 765 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PKN2Q16513 984 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 ARMC4Q5T2S8 1044 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PRR5LQ6MZQ0 368 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 FOXR1Q6PIV2 292 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 BNIPLQ7Z465 357 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 YTHDF3Q7Z739 585 aaKnown RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 CREG2Q8IUH2 290 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 ABRAQ8N0Z2 381 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 OR8H2Q8N162 312 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 SREK1IP1Q8N9Q2 155 aaPredicted RBP8□□□□□ -1.13
NEDD9-204ENST00000448183 RXFP2Q8WXD0 754 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 MIEF2Q96C03 454 aa8□□□□□ -1.13
NEDD9-204ENST00000448183 PPP1R10Q96QC0 940 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms