RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 PRPF39Q86UA1 669 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 ZNF410Q86VK4 478 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 SLC26A11Q86WA9 606 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 MCUQ8NE86 351 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 NLRP7Q8WX94 980 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 TLE6Q9H808 572 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 NPHS2Q9NP85 383 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 HAO1Q9UJM8 370 aa16.72■□□□□ 0.27
HLA-DQB2-231ENST00000435145 SBF1O95248 1867 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 TRDMT1O14717 391 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 TGDSO95455 350 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 GSTA2P09210 222 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 PTPN9P43378 593 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 ARHGAP17Q68EM7 881 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 C4orf22Q6V702 233 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 ZDHHC17Q8IUH5 632 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 LRRC39Q96DD0 335 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 NGRNQ9NPE2 291 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 ETNK2Q9NVF9 386 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 NOP53Q9NZM5 478 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 GTF2IRD1Q9UHL9 959 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 LNPEPQ9UIQ6 1025 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 C15orf41Q9Y2V0 281 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 IKBKGQ9Y6K9 419 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 NUMBLQ9Y6R0 609 aa16.71■□□□□ 0.27
HLA-DQB2-231ENST00000435145 RALGAPA2Q2PPJ7 1873 aa16.71■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CITO14578 2027 aa16.71■□□□□ 0.26
HLA-DQB2-231ENST00000435145 WDR91A4D1P6 747 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 KLF11O14901 512 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ANP32DO95626 131 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZBED1O96006 694 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 HOXD8P13378 290 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SCNN1AP37088 669 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PRKD1Q15139 912 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TTC39BQ5VTQ0 682 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ARCQ7LC44 396 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CLNKQ7Z7G1 428 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ACOT1Q86TX2 421 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 RFWD2Q8NHY2 731 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CENPIQ92674 756 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 KLC2Q9H0B6 622 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CXCL16Q9H2A7 254 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 H3BRB1 525 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PPEF2O14830 753 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 HNRNPCL1O60812 293 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PYGBP11216 843 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CCNFP41002 786 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 RPL34P49207 117 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 RASSF2P50749 326 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CCNG1P51959 295 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 DPYSL2Q16555 572 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TAF1BQ53T94 588 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SCYL2Q6P3W7 929 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 UNC93AQ86WB7 457 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 LRRC52Q8N7C0 313 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 APBB2Q92870 758 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SNX27Q96L92 541 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZMAT2Q96NC0 199 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MYCBPQ99417 103 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TSSK1BQ9BXA7 367 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TRIM55Q9BYV6 548 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TUT1Q9H6E5 874 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 NRDE2Q9H7Z3 1164 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MKS1Q9NXB0 559 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZFP69BQ9UJL9 534 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 HEY1Q9Y5J3 304 aa16.7■□□□□ 0.26
HLA-DQB2-231ENST00000435145 DNAJC6O75061 913 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GCATO75600 419 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TOMM70O94826 608 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 HOXA11P31270 313 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GJA5P36382 358 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GRIK4Q16099 956 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 LRRC6Q86X45 466 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CDKL3Q8IVW4 592 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SCUBE3Q8IX30 993 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TBC1D10AQ9BXI6 508 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 KCNK13Q9HB14 408 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GEMIN8Q9NWZ8 242 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZC3H7BQ9UGR2 993 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 RPL26L1Q9UNX3 145 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SLC15A5A6NIM6 579 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CBX6O95503 412 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CYP2F1P24903 491 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 L1CAMP32004 1257 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ELF1P32519 619 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SNX16P57768 344 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 R3HDM1Q15032 1099 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SYCP2LQ5T4T6 812 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZNF534Q76KX8 674 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SLC26A9Q7LBE3 791 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZNF467Q7Z7K2 595 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MTDHQ86UE4 582 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GIMAP7Q8NHV1 300 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CFAP36Q96G28 342 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 FAM111AQ96PZ2 611 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ADAMTS10Q9H324 1103 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms