RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 NT5C1AQ9BXI3 368 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDAC4-202ENST00000430200 SCML2Q9UQR0 700 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 PCDHA5Q9Y5H7 936 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 GON4LQ3T8J9 2241 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CFAP47Q6ZTR5 3102 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 TMEM131Q92545 1883 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 LRP3O75074 770 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ATG13O75143 517 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 KLF8O95600 359 aaPredicted RBP12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CALCAP01258 141 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 KLKB1P03952 638 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 KRT13P13646 458 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 P4HA1P13674 534 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 TIE1P35590 1138 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 MPLP40238 635 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 KIF11P52732 1056 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 FOXK2Q01167 660 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 AMPD2Q01433 879 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ENPEPQ07075 957 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CRY1Q16526 586 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 COBLL1Q53SF7 1204 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 DCAF17Q5H9S7 520 aaPredicted RBP12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ZNF658Q5TYW1 1059 aaPredicted RBP12.43□□□□□ -0.42
HDAC4-202ENST00000430200 KRT39Q6A163 491 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ISM2Q6H9L7 571 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 Q6ZNB5 142 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CAMKK1Q8N5S9 505 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 KIAA1958Q8N8K9 716 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 TXNDC5Q8NBS9 432 aaKnown RBP12.43□□□□□ -0.42
HDAC4-202ENST00000430200 NDRG1Q92597 394 aaKnown RBP12.43□□□□□ -0.42
HDAC4-202ENST00000430200 SECISBP2LQ93073 1101 aaKnown RBP12.43□□□□□ -0.42
HDAC4-202ENST00000430200 SLC35C1Q96A29 364 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ERLEC1Q96DZ1 483 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ZC3H10Q96K80 434 aaKnown RBP12.43□□□□□ -0.42
HDAC4-202ENST00000430200 PNKPQ96T60 521 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ACOX2Q99424 681 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CYP3A43Q9HB55 503 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CD248Q9HCU0 757 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CD93Q9NPY3 652 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 ARHGEF4Q9NR80 690 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 CISHQ9NSE2 258 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 EBF1Q9UH73 591 aa12.43□□□□□ -0.42
HDAC4-202ENST00000430200 SLC30A4O14863 429 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 GADD45BO75293 160 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-202ENST00000430200 ADH1CP00326 375 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 EIF2DP41214 584 aaKnown RBP12.42□□□□□ -0.42
HDAC4-202ENST00000430200 DGKEP52429 567 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 NR1H3Q13133 447 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC4-202ENST00000430200 GPR161Q8N6U8 529 aaKnown RBP12.42□□□□□ -0.42
HDAC4-202ENST00000430200 TERB1Q8NA31 727 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 FBXL13Q8NEE6 735 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 OLIG1Q8TAK6 271 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 RLN3Q8WXF3 142 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 KAT5Q92993 513 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
HDAC4-202ENST00000430200 CNOT6LQ96LI5 555 aaKnown RBP12.42□□□□□ -0.42
HDAC4-202ENST00000430200 DUSP9Q99956 384 aaKnown RBP12.42□□□□□ -0.42
HDAC4-202ENST00000430200 ZSWIM1Q9BR11 485 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 IMPG2Q9BZV3 1241 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 PNPLA8Q9NP80 782 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 SPHK2Q9NRA0 654 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 COMMD8Q9NX08 183 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 RAB20Q9NX57 234 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 MAN1B1Q9UKM7 699 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 SH3BP1Q9Y3L3 701 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 USP3Q9Y6I4 520 aa12.42□□□□□ -0.42
HDAC4-202ENST00000430200 NUMA1Q14980 2115 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 A0A0A0MRY4 1105 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 PRR5-ARHGAP8B1AHC4 643 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 PATE3B3GLJ2 98 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 PRRT4C9JH25 899 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 SLC9A3R1O14745 358 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-202ENST00000430200 SLC16A3O15427 465 aaKnown RBP12.41□□□□□ -0.42
HDAC4-202ENST00000430200 CACNG3O60359 315 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 GABBR2O75899 941 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 STC2O76061 302 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 KIF20AO95235 890 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 EPB41P11171 864 aaKnown RBP12.41□□□□□ -0.42
HDAC4-202ENST00000430200 RARGP13631 454 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 RPL13P26373 211 aaKnown RBP12.41□□□□□ -0.42
HDAC4-202ENST00000430200 GTF2H1P32780 548 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 WASP42768 502 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 ARHGAP8P85298 464 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 GOLGA7BQ2TAP0 167 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 PMS2CLQ68D20 193 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 CCDC186Q7Z3E2 898 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 PIGZQ86VD9 579 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 NETO1Q8TDF5 533 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 BHMTQ93088 406 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 DUSP16Q9BY84 665 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 FBXO44Q9H4M3 255 aa12.41□□□□□ -0.42
HDAC4-202ENST00000430200 TLR8Q9NR97 1041 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms