RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 PPP1R2P41236 205 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 IRF5Q13568 498 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 RWDD4Q6NW29 188 aaKnown RBP21.15■□□□□ 0.98
AP1S3-205ENST00000415298 PPP1R2P3Q6NXS1 205 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 CYP4V2Q6ZWL3 525 aaPredicted RBP21.15■□□□□ 0.98
AP1S3-205ENST00000415298 SOCS4Q8WXH5 440 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 NCKIPSDQ9NZQ3 722 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 RSL24D1Q9UHA3 163 aaKnown RBP21.15■□□□□ 0.98
AP1S3-205ENST00000415298 PCSK1NQ9UHG2 260 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 SFI1A8K8P3 1242 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 SLITRK3O94933 977 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 ESRRBO95718 433 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 TXNP10599 105 aaKnown RBP21.15■□□□□ 0.98
AP1S3-205ENST00000415298 STX2P32856 288 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 PSMC6P62333 389 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 STK4Q13043 487 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 BBS9Q3SYG4 887 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 MMEL1Q495T6 779 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 TAF1BQ53T94 588 aaPredicted RBP21.15■□□□□ 0.98
AP1S3-205ENST00000415298 RRAGBQ5VZM2 374 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 POTEGQ6S5H5 508 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 CCDC138Q96M89 665 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 KIAA1024Q9UPX6 916 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 LZTS1Q9Y250 596 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 NOSIPQ9Y314 301 aaKnown RBP21.15■□□□□ 0.98
AP1S3-205ENST00000415298 MYH11P35749 1972 aa21.15■□□□□ 0.98
AP1S3-205ENST00000415298 A0A1W2PQJ5 194 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 RASGRF2O14827 1237 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 PALMO75781 387 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 HNRNPH3P31942 346 aaKnown RBP21.14■□□□□ 0.98
AP1S3-205ENST00000415298 AFMP43652 599 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 KRT81Q14533 505 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 SLC29A2Q14542 456 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 ZNF829Q3KNS6 432 aaPredicted RBP21.14■□□□□ 0.98
AP1S3-205ENST00000415298 VSTM1Q6UX27 236 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.14■□□□□ 0.98
AP1S3-205ENST00000415298 VPS52Q8N1B4 723 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.14■□□□□ 0.98
AP1S3-205ENST00000415298 EPS8L3Q8TE67 593 aaKnown RBP21.14■□□□□ 0.98
AP1S3-205ENST00000415298 APBA2Q99767 749 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 HSD17B14Q9BPX1 270 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 TUBB6Q9BUF5 446 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 TRIM55Q9BYV6 548 aa21.14■□□□□ 0.98
AP1S3-205ENST00000415298 XAB2Q9HCS7 855 aaKnown RBP21.14■□□□□ 0.98
AP1S3-205ENST00000415298 ZNF236Q9UL36 1845 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 GYG2O15488 501 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 GGPS1O95749 300 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 FTCDO95954 541 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 SLC1A1P43005 524 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 IST1P53990 364 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 DSTNP60981 165 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 ADAM17P78536 824 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 INSCQ1MX18 579 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 TPH2Q8IWU9 490 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 CIB1Q99828 191 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 DHRS9Q9BPW9 319 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 MARCH7Q9H992 704 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 JPH1Q9HDC5 661 aaPredicted RBP21.14■□□□□ 0.97
AP1S3-205ENST00000415298 ARHGAP20Q9P2F6 1191 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 ZFP69BQ9UJL9 534 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 TMCC3Q9ULS5 477 aa21.14■□□□□ 0.97
AP1S3-205ENST00000415298 SYCE1LA8MT33 242 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 E9PMD0 336 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 H3BSA7 217 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 GOLGA8MH3BSY2 632 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 SEC24DO94855 1032 aaPredicted RBP21.13■□□□□ 0.97
AP1S3-205ENST00000415298 STAMBPO95630 424 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 TRIM32Q13049 653 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 CCDC58Q4VC31 144 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 ZNF746Q6NUN9 644 aaPredicted RBP21.13■□□□□ 0.97
AP1S3-205ENST00000415298 SH3RF1Q7Z6J0 888 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 ANKRD42Q8N9B4 389 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 ACTRT1Q8TDG2 376 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 TRIB2Q92519 343 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 PLEKHA8Q96JA3 519 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 OLFM1Q99784 485 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 CALN1Q9BXU9 219 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 RNF38Q9H0F5 515 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 FANCEQ9HB96 536 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 SLC9A2Q9UBY0 812 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 DBR1Q9UK59 544 aaKnown RBP21.13■□□□□ 0.97
AP1S3-205ENST00000415298 PCDHGA8Q9Y5G5 932 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 TAC1P20366 129 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 EEF1GP26641 437 aaKnown RBP21.13■□□□□ 0.97
AP1S3-205ENST00000415298 CLK3P49761 638 aaKnown RBP21.13■□□□□ 0.97
AP1S3-205ENST00000415298 POU5F1Q01860 360 aaKnown RBP21.13■□□□□ 0.97
AP1S3-205ENST00000415298 PDXDC2PQ6P474 469 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 BRSK2Q8IWQ3 736 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 CADM3Q8N126 398 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 SGCDQ92629 289 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 CALML4Q96GE6 196 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 SENP7Q9BQF6 1050 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 IMPG2Q9BZV3 1241 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 ABHD16BQ9H3Z7 469 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 BLOC1S4Q9NUP1 217 aa21.13■□□□□ 0.97
AP1S3-205ENST00000415298 HEMK1Q9Y5R4 338 aaPredicted RBP21.13■□□□□ 0.97
AP1S3-205ENST00000415298 P4HA1P13674 534 aa21.12■□□□□ 0.97
AP1S3-205ENST00000415298 M6PRP20645 277 aa21.12■□□□□ 0.97
AP1S3-205ENST00000415298 IL32P24001 234 aa21.12■□□□□ 0.97
AP1S3-205ENST00000415298 EIF4A3P38919 411 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms