RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 INTS2Q9H0H0 1204 aaKnown RBP11.51□□□□□ -0.57
A1CF-208ENST00000414883 TLR8Q9NR97 1041 aaKnown RBP11.51□□□□□ -0.57
A1CF-208ENST00000414883 POLR3BQ9NW08 1133 aaPredicted RBP11.51□□□□□ -0.57
A1CF-208ENST00000414883 TSPAN16Q9UKR8 245 aa11.51□□□□□ -0.57
A1CF-208ENST00000414883 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.51□□□□□ -0.57
A1CF-208ENST00000414883 CACNA1AO00555 2505 aa11.51□□□□□ -0.57
A1CF-208ENST00000414883 K7EQS6 105 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 XPO1O14980 1071 aaKnown RBP11.5□□□□□ -0.57
A1CF-208ENST00000414883 MDM4O15151 490 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 NFATC1O95644 943 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 PAEPP09466 180 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 CCDC192P0DO97 292 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 VDRP11473 427 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 RARGP13631 454 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 CCR3P51677 355 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 BCAT1P54687 386 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 SGO2Q562F6 1265 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 TMEM270Q6UE05 265 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 Q6ZNB5 142 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 HTR3DQ70Z44 454 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 DDX42Q86XP3 938 aaKnown RBP eCLIP11.5□□□□□ -0.57
A1CF-208ENST00000414883 BBS7Q8IWZ6 715 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 UBA3Q8TBC4 463 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 SLC35F5Q8WV83 523 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 NKD2Q969F2 451 aaPredicted RBP11.5□□□□□ -0.57
A1CF-208ENST00000414883 P2RY13Q9BPV8 354 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 CRACR2AQ9BSW2 395 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 NUP62CLQ9H1M0 184 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 CLIC5Q9NZA1 410 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
A1CF-208ENST00000414883 NUDT5Q9UKK9 219 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 KIAA1257Q9ULG3 409 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.5□□□□□ -0.57
A1CF-208ENST00000414883 PCDHGA2Q9Y5H1 932 aa11.5□□□□□ -0.57
A1CF-208ENST00000414883 BECN2A8MW95 431 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 CHURC1-FNTBB4DL54 471 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 FGFR1OPO95684 399 aaKnown RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 KLKB1P03952 638 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 TRIM21P19474 475 aaKnown RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 SLC9A1P19634 815 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 DRD1P21728 446 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 BRD2P25440 801 aaKnown RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 HOXA6P31267 233 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 PLA2G4AP47712 749 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 CXCL12P48061 93 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 SLC6A11P48066 632 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 YWHAEP62258 255 aaKnown RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 BST2Q10589 180 aaKnown RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 GRSF1Q12849 480 aaKnown RBP eCLIP11.49□□□□□ -0.57
A1CF-208ENST00000414883 CNGA2Q16280 664 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 PMF1Q6P1K2 205 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 GJB7Q6PEY0 223 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 TRIM65Q6PJ69 517 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 RBBP8NLQ8NC74 664 aaPredicted RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 CD101Q93033 1021 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 IPO9Q96P70 1041 aaKnown RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 FAM126AQ9BYI3 521 aaPredicted RBP11.49□□□□□ -0.57
A1CF-208ENST00000414883 ULBP1Q9BZM6 244 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 SEMA4AQ9H3S1 761 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 THAP9Q9H5L6 903 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 PCDHB4Q9Y5E5 795 aa11.49□□□□□ -0.57
A1CF-208ENST00000414883 A0A0A0MRY4 1105 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 GTPBP10A4D1E9 387 aaKnown RBP11.48□□□□□ -0.57
A1CF-208ENST00000414883 SLC9A3R1O14745 358 aaPredicted RBP11.48□□□□□ -0.57
A1CF-208ENST00000414883 HOXC11O43248 304 aaPredicted RBP11.48□□□□□ -0.57
A1CF-208ENST00000414883 RNF40O75150 1001 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 STC2O76061 302 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 ZBED1O96006 694 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 IRF1P10914 325 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 CD19P15391 556 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 PON1P27169 355 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 ERCC5P28715 1186 aaPredicted RBP11.48□□□□□ -0.57
A1CF-208ENST00000414883 ATP5C1P36542 298 aaKnown RBP11.48□□□□□ -0.57
A1CF-208ENST00000414883 RPL34P49207 117 aaKnown RBP11.48□□□□□ -0.57
A1CF-208ENST00000414883 TKTL1P51854 596 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 CETN1Q12798 172 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 LY6G5CQ5SRR4 150 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 TMEM25Q86YD3 366 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 SCML4Q8N228 414 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 KCTD13Q8WZ19 329 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 OTUB2Q96DC9 234 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 DNAI2Q9GZS0 605 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 EPC1Q9H2F5 836 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 UBE2TQ9NPD8 197 aaPredicted RBP11.48□□□□□ -0.57
A1CF-208ENST00000414883 ACP6Q9NPH0 428 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 TBC1D14Q9P2M4 693 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 DNMT3LQ9UJW3 386 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 HCN2Q9UL51 889 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 ABCA7Q8IZY2 2146 aa11.48□□□□□ -0.57
A1CF-208ENST00000414883 YJEFN3A6XGL0 299 aa11.47□□□□□ -0.57
A1CF-208ENST00000414883 E7ENQ6 273 aa11.47□□□□□ -0.57
A1CF-208ENST00000414883 TRIM24O15164 1050 aa11.47□□□□□ -0.57
A1CF-208ENST00000414883 HRO43593 1189 aa11.47□□□□□ -0.57
A1CF-208ENST00000414883 LMNAP02545 664 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms