RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 FAM84BQ96KN1 310 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PPP1R10Q96QC0 940 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 IL12RB2Q99665 862 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 TINF2Q9BSI4 451 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PRDM16Q9HAZ2 1276 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 VAT1LQ9HCJ6 419 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PRMT8Q9NR22 394 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ZSCAN32Q9NX65 697 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CNTN3Q9P232 1028 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 WNT16Q9UBV4 365 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 MAD2L2Q9UI95 211 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 TNCP24821 2201 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 BAHCC1Q9P281 2608 aa3.28□□□□□ -1.89
RGPD3-202ENST00000409886 TM4SF5O14894 197 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 GSC2O15499 205 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 NDUFB5O43674 189 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 SERPINB7O75635 380 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 DDX58O95786 925 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CAPNS1P04632 268 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ITGA2BP08514 1039 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CNR2P34972 360 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 TAS2R40P59535 323 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 PDE4DQ08499 809 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 SYDE2Q5VT97 1194 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 IQCEQ6IPM2 695 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 TRNP1Q6NT89 227 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 RINLQ6ZS11 566 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CPLX4Q7Z7G2 160 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 DPP9Q86TI2 863 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CACNA2D3Q8IZS8 1091 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CRIPAKQ8N1N5 446 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ZBTB44Q8NCP5 570 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 MAGEC3Q8TD91 643 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 STK32AQ8WU08 396 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 PSPC1Q8WXF1 523 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CRYGNQ8WXF5 182 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CSF3RQ99062 836 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CORO1BQ9BR76 489 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 SPATA16Q9BXB7 569 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ECT2Q9H8V3 914 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 DDX4Q9NQI0 724 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 MAN1C1Q9NR34 630 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 TOPORSQ9NS56 1045 aaPredicted RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CEP126Q9P2H0 1117 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 SCML1Q9UN30 329 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 DUSP12Q9UNI6 340 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 PLA2G4CQ9UP65 541 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ASTN1O14525 1302 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 A0A0U1RQS6 177 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CCP110O43303 1012 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 SSX4O60224 188 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 MLYCDO95822 493 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CD48P09326 243 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 NUDT17P0C025 328 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 P4HA1P13674 534 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 RPL13P26373 211 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 NMT1P30419 496 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ABCG1P45844 678 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 NFIAQ12857 509 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 TRDNQ13061 729 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 NR1H3Q13133 447 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 RAPGEF1Q13905 1077 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 RCN2Q14257 317 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 SF3B4Q15427 424 aaKnown RBP eCLIP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 FIGNQ5HY92 759 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 FAM117BQ6P1L5 589 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 RPS27LQ71UM5 84 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ANKS4BQ8N8V4 417 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ZCCHC14Q8WYQ9 949 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CCDC124Q96CT7 223 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CYTH2Q99418 400 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 GORASP1Q9BQQ3 440 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 HAUS8Q9BT25 410 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 MARCH7Q9H992 704 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 SACM1LQ9NTJ5 587 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CLDND1Q9NY35 253 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 AIPL1Q9NZN9 384 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 USP15Q9Y4E8 981 aaPredicted RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 HCFC2Q9Y5Z7 792 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 UMODL1Q5DID0 1318 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ZBBXA8MT70 800 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 USP17L10C9JJH3 530 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 E9PAM4 449 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 FAM86B1E9PN63 330 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CLDN3O15551 220 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 ARHGEF15O94989 841 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 RETP07949 1114 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 VIMP08670 466 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 INHBBP09529 407 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 FAM86B2P0C5J1 330 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 UGT1A1P22309 533 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 EIF4BP23588 611 aaKnown RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 GBP2P32456 591 aaPredicted RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 DNM2P50570 870 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 MAPK10P53779 464 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CACNA2D1P54289 1103 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 CLCQ05315 142 aa3.27□□□□□ -1.89
RGPD3-202ENST00000409886 POLD3Q15054 466 aaPredicted RBP3.27□□□□□ -1.89
RGPD3-202ENST00000409886 PPP1R3AQ16821 1122 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms