RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 NDUFAF5Q5TEU4 345 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 PLEKHA7Q6IQ23 1121 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 GALNT7Q86SF2 657 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 BBOF1Q8ND07 529 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 STRBPQ96SI9 672 aaKnown RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 TSSK1BQ9BXA7 367 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 RIC8BQ9NVN3 520 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 GNEQ9Y223 722 aaKnown RBP10.04□□□□□ -0.8
CDRT1-204ENST00000395906 CORINQ9Y5Q5 1042 aa10.04□□□□□ -0.8
CDRT1-204ENST00000395906 CACNA1SQ13698 1873 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 HOXC11O43248 304 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 MARCH6O60337 910 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 ATE1O95260 518 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 H6PDO95479 791 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 DLDP09622 509 aaKnown RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 ATICP31939 592 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 COILP38432 576 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 TRAPPC10P48553 1259 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PHC1P78364 1004 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 KDSRQ06136 332 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 STK11Q15831 433 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 IGFN1Q86VF2 1251 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF420Q8TAQ5 688 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 LRGUKQ96M69 825 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 SOX13Q9UN79 622 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 NOSIPQ9Y314 301 aaKnown RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 IRS2Q9Y4H2 1338 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 CCRL2O00421 344 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 TYROBPO43914 113 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 NUAK1O60285 661 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 TGFB3P10600 412 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 FCER1AP12319 257 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 DPEP1P16444 411 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PSMC3P17980 439 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 CAV1Q03135 178 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PDK1Q15118 436 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 CYP1B1Q16678 543 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 BBS9Q3SYG4 887 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PPM1LQ5SGD2 360 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 C6orf52Q5T4I8 152 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 KIAA1841Q6NSI8 718 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF746Q6NUN9 644 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 IDO2Q6ZQW0 420 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 IRF2BP2Q7Z5L9 587 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 SETD3Q86TU7 594 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 TDRPQ86YL5 185 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PQLC1Q8N2U9 271 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 TNFRSF25Q93038 417 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 INO80BQ9C086 356 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 CLPBQ9H078 707 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 RPF2Q9H7B2 306 aaKnown RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 EPB41L4AQ9HCS5 686 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-204ENST00000395906 STMN3Q9NZ72 180 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PTPN22Q9Y2R2 807 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 AP4S1Q9Y587 144 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 TACC3Q9Y6A5 838 aa10.03□□□□□ -0.8
CDRT1-204ENST00000395906 PSME4Q14997 1843 aa10.02□□□□□ -0.8
CDRT1-204ENST00000395906 ARHGEF35A5YM69 484 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 GIPC1O14908 333 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 AREL1O15033 823 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 MSI1O43347 362 aaKnown RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 KRT5P13647 590 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 NDST2P52849 883 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 STX1BP61266 288 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 UBE3CQ15386 1083 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 ANKRD26P1Q6NSI1 321 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 BRSK2Q8IWQ3 736 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 PLPP6Q8IY26 295 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 ADCY4Q8NFM4 1077 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 HM13Q8TCT9 377 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 GLMNQ92990 594 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 NSUN4Q96CB9 384 aaKnown RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 SHISA4Q96DD7 197 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 NLRP4Q96MN2 994 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 DOK1Q99704 481 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 RNF26Q9BY78 433 aaPredicted RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 ZC3H12CQ9C0D7 883 aaKnown RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 RSPH9Q9H1X1 276 aaPredicted RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 WDR6Q9NNW5 1121 aaKnown RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 SSU72Q9NP77 194 aaKnown RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 ABI2Q9NYB9 513 aaPredicted RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 DNAJC12Q9UKB3 198 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 POLIQ9UNA4 740 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 PSMD13Q9UNM6 376 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 SCAF8Q9UPN6 1271 aaKnown RBP10.02□□□□□ -0.81
CDRT1-204ENST00000395906 CFL2Q9Y281 166 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 SLX4Q8IY92 1834 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 ARPC4-TTLL3A0A0A6YYG9 625 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 A0A1B0GTW7 788 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 MINDY4BA8MYZ0 360 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 TP73O15350 636 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 GPC4O75487 556 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 PLEKHA8P1O95397 391 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 ABHD2P08910 425 aa10.02□□□□□ -0.81
CDRT1-204ENST00000395906 MYL2P10916 166 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms