RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SLC7A14Q8TBB6 771 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 LRRC37BQ96QE4 947 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 BTBD2Q9BX70 525 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 FTHL17Q9BXU8 183 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 MRPL4Q9BYD3 311 aaKnown RBP6.18□□□□□ -1.42
AP3S1-202ENST00000395548 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 ZNF700Q9H0M5 742 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 TCP11L1Q9NUJ3 509 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 CYP39A1Q9NYL5 469 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 DKK4Q9UBT3 224 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 FEM1BQ9UK73 627 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 FBXO9Q9UK97 447 aaPredicted RBP6.18□□□□□ -1.42
AP3S1-202ENST00000395548 MTF2Q9Y483 593 aaPredicted RBP6.18□□□□□ -1.42
AP3S1-202ENST00000395548 DDX49Q9Y6V7 483 aaKnown RBP6.18□□□□□ -1.42
AP3S1-202ENST00000395548 SHROOM3Q8TF72 1996 aa6.18□□□□□ -1.42
AP3S1-202ENST00000395548 GREB1Q4ZG55 1949 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 CACNA1FO60840 1977 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 C17orf102A2RUQ5 167 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 HAS3O00219 553 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 KCNK3O14649 394 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 MAFO75444 373 aaPredicted RBP6.17□□□□□ -1.42
AP3S1-202ENST00000395548 HSP90AA1P07900 732 aaKnown RBP6.17□□□□□ -1.42
AP3S1-202ENST00000395548 NBPF7P0C2Y1 421 aaPredicted RBP6.17□□□□□ -1.42
AP3S1-202ENST00000395548 CD53P19397 219 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 CA8P35219 290 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 MPLP40238 635 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 CXCL12P48061 93 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 ALDH5A1P51649 535 aaPredicted RBP6.17□□□□□ -1.42
AP3S1-202ENST00000395548 GUCY2FP51841 1108 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 POU5F1BQ06416 359 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 GIT2Q14161 759 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 TWISTNBQ3B726 338 aaPredicted RBP6.17□□□□□ -1.42
AP3S1-202ENST00000395548 ZNF585AQ6P3V2 769 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 CACNA2D4Q7Z3S7 1137 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 CISD2Q8N5K1 135 aaKnown RBP6.17□□□□□ -1.42
AP3S1-202ENST00000395548 PAF1Q8N7H5 531 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 COLGALT1Q8NBJ5 622 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 DEFB124Q8NES8 71 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 Q8TCH9 128 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 NINJ1Q92982 152 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 NEIL1Q96FI4 390 aaPredicted RBP6.17□□□□□ -1.42
AP3S1-202ENST00000395548 ZDHHC5Q9C0B5 715 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 TMEM9BQ9NQ34 198 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 KCNH7Q9NS40 1196 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 ANKMY1Q9P2S6 941 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 NRCAMQ92823 1304 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 FANCIQ9NVI1 1328 aa6.17□□□□□ -1.42
AP3S1-202ENST00000395548 TTC3P53804 2025 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 PLXNA4Q9HCM2 1894 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 ANHXE9PGG2 379 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 SCDO00767 359 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 MUSKO15146 869 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 FGAP02671 866 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 ALAS1P13196 640 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 FNTBP49356 437 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 TIMM10P62072 90 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 GPC5P78333 572 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 IL13RA1P78552 427 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 SIM1P81133 766 aaPredicted RBP6.16□□□□□ -1.42
AP3S1-202ENST00000395548 MCL1Q07820 350 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 STILQ15468 1287 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 CDSNQ15517 529 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 TCTN3Q6NUS6 607 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 FAM43BQ6ZT52 329 aaPredicted RBP6.16□□□□□ -1.42
AP3S1-202ENST00000395548 TAX1BP1Q86VP1 789 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 AMOTL1Q8IY63 956 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 CHCHD4Q8N4Q1 142 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 UBR7Q8N806 425 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 MDM1Q8TC05 714 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 GNRHR2Q96P88 292 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 WDR6Q9NNW5 1121 aaKnown RBP6.16□□□□□ -1.42
AP3S1-202ENST00000395548 CHST12Q9NRB3 414 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 IL17BQ9UHF5 180 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 COQ6Q9Y2Z9 468 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 TESMINQ9Y4I5 508 aa6.16□□□□□ -1.42
AP3S1-202ENST00000395548 ZFP37Q9Y6Q3 630 aaPredicted RBP6.16□□□□□ -1.42
AP3S1-202ENST00000395548 URB1O60287 2271 aaKnown RBP6.16□□□□□ -1.42
AP3S1-202ENST00000395548 FOCADQ5VW36 1801 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 SLC12A8A0AV02 714 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 GOLGA6CA6NDK9 693 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 GOLGA6BA6NDN3 693 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 SLC28A2O43868 658 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 N4BP1O75113 896 aaKnown RBP6.15□□□□□ -1.42
AP3S1-202ENST00000395548 HIP1RO75146 1068 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 CXCL14O95715 111 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 UQCRFS1P1P0C7P4 283 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 GOLGA6DP0CG33 693 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 GHRP10912 638 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 LAMP2P13473 410 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 SCG2P13521 617 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 CPEP16870 476 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 CD72P21854 359 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 BDNFP23560 247 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 RAB27AP51159 221 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 DYNLL1P63167 89 aaKnown RBP6.15□□□□□ -1.42
AP3S1-202ENST00000395548 SRSF5Q13243 272 aaKnown RBP6.15□□□□□ -1.42
AP3S1-202ENST00000395548 HTR4Q13639 388 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 SEC23AQ15436 765 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 C10orf62Q5T681 223 aaPredicted RBP6.15□□□□□ -1.42
AP3S1-202ENST00000395548 CHST3Q7LGC8 479 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms