RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 MCUQ8NE86 351 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 OR6B3Q8NGW1 331 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 PCED1BQ96HM7 432 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 POPDC2Q9HBU9 364 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 EIF2B3Q9NR50 452 aaKnown RBP14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 DDX43Q9NXZ2 648 aaKnown RBP14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 KLK14Q9P0G3 267 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 HELZP42694 1942 aaKnown RBP14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 ALPK3Q96L96 1907 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 C5orf60A6NFR6 353 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 WASH4PA8MWX3 477 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 CHADO15335 359 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 NBNO60934 754 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 LRRC8DQ7L1W4 858 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 SPATA17Q96L03 361 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 SERPINB12Q96P63 405 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 QKIQ96PU8 341 aaKnown RBP eCLIP14.8□□□□□ -0.042e-6■□□□□ 11
CDC42SE2-202ENST00000395246 SSU72Q9NP77 194 aaKnown RBP14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 MAFFQ9ULX9 164 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 TTC4O95801 387 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 IGFBP6P24592 240 aaPredicted RBP14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 CXCR3P49682 368 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 CCDC105Q8IYK2 499 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 PCDH19Q8TAB3 1148 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 C1orf54Q8WWF1 131 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 BRD8Q9H0E9 1235 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 OSBPL2Q9H1P3 480 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 SCNN1GP51170 649 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 RNASE9P60153 205 aaKnown RBP14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 TTC25Q96NG3 672 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 ADAM2Q99965 735 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 SNRNP25Q9BV90 132 aaKnown RBP14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 GGA2Q9UJY4 613 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 TPX2Q9ULW0 747 aaKnown RBP14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 FAN1Q9Y2M0 1017 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 DCLK1O15075 740 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 HCRTO43612 131 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 B4GALT3O60512 393 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 GSTA2P09210 222 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 SDC4P31431 198 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 ORC1Q13415 861 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 MAP7D3Q8IWC1 876 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZSCAN18Q8TBC5 510 aaPredicted RBP14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 FAM172AQ8WUF8 416 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 ST7Q9NRC1 585 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 KRT14P02533 472 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 CD48P09326 243 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 FAM200BP0CF97 657 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 SSTR3P32745 418 aaPredicted RBP14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 RDXP35241 583 aaKnown RBP14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 YWHAZP63104 245 aaKnown RBP14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 BFSP2Q13515 415 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 SH3PXD2AQ5TCZ1 1133 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 EMC1Q8N766 993 aa14.79□□□□□ -0.04
CDC42SE2-202ENST00000395246 ENPP3O14638 875 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 MMP13P45452 471 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 IFT81Q8WYA0 676 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 CFAP57Q96MR6 1250 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 FBXW11Q9UKB1 542 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 SNX24Q9Y343 169 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 AGTP01019 485 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZDHHC11BP0C7U3 371 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 TPSB2P20231 275 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 ITGA8P53708 1063 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 CBX1P83916 185 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 DHX9Q08211 1270 aaKnown RBP14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 TPSAB1Q15661 275 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 C5orf22Q49AR2 442 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 SCUBE3Q8IX30 993 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 RAET1EQ8TD07 263 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 ARL8AQ96BM9 186 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 CLUHO75153 1309 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 F9P00740 461 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 GCAP28676 217 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 OTUD4Q01804 1114 aaKnown RBP14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 MTA1Q13330 715 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 PTPROQ16827 1216 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 NCBP2-AS2Q69YL0 99 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 OR10T2Q8NGX3 314 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 ATG4AQ8WYN0 398 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZNF689Q96CS4 500 aaPredicted RBP14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 KLC2Q9H0B6 622 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 NRDE2Q9H7Z3 1164 aa14.78□□□□□ -0.04
CDC42SE2-202ENST00000395246 HOXA2O43364 376 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 TAF5Q15542 800 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 NOMO2Q5JPE7 1267 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 OR6B2Q6IFH4 312 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 VSTM1Q6UX27 236 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 PPIL6Q8IXY8 311 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZNF683Q8IZ20 524 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 ACTL9Q8TC94 416 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 KCTD15Q96SI1 283 aaPredicted RBP14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 PAAF1Q9BRP4 392 aa14.77□□□□□ -0.04
CDC42SE2-202ENST00000395246 PPP1R12AO14974 1030 aaPredicted RBP14.77□□□□□ -0.05
CDC42SE2-202ENST00000395246 DDHD2O94830 711 aa14.77□□□□□ -0.05
CDC42SE2-202ENST00000395246 PAPLNO95428 1278 aa14.77□□□□□ -0.05
CDC42SE2-202ENST00000395246 IGLV3-27P01718 113 aa14.77□□□□□ -0.05
CDC42SE2-202ENST00000395246 KRT10P13645 584 aa14.77□□□□□ -0.05
CDC42SE2-202ENST00000395246 ATF2P15336 505 aa14.77□□□□□ -0.05
CDC42SE2-202ENST00000395246 KCNJ1P48048 391 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms