RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
CTSC-202ENST00000393301 TULP1O00294 542 aaPredicted RBP13.05□□□□□ -0.32
CTSC-202ENST00000393301 ADAM23O75077 832 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 ALDH1A2O94788 518 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 SLC6A11P48066 632 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 NDST1P52848 882 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 KLHL40Q2TBA0 621 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 EOGTQ5NDL2 527 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 INTS8Q75QN2 995 aaKnown RBP13.05□□□□□ -0.32
CTSC-202ENST00000393301 ACOT1Q86TX2 421 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 TERB1Q8NA31 727 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 KLF16Q9BXK1 252 aaPredicted RBP13.05□□□□□ -0.32
CTSC-202ENST00000393301 NUP62CLQ9H1M0 184 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 CCSER2Q9H7U1 834 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 CD248Q9HCU0 757 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 ARHGEF4Q9NR80 690 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 SPHK2Q9NRA0 654 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 GMIPQ9P107 970 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 HMGXB4Q9UGU5 601 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 FRMD4BQ9Y2L6 1034 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 ZFHX4Q86UP3 3567 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
CTSC-202ENST00000393301 IGF2RP11717 2491 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 ASPMQ8IZT6 3477 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 ANTXRLA6NF34 631 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 SGK1O00141 431 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 PSMA7O14818 248 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 DCLK1O15075 740 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 CALUO43852 315 aaPredicted RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 CACNG3O60359 315 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 TLR5O60602 858 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 CILPO75339 1184 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 BEST1O76090 585 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 CAVIN2O95810 425 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 HLA-DRAP01903 254 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 BMP6P22004 513 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 GTF2H1P32780 548 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 HOXD12P35452 270 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 DPP6P42658 865 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 STIM1Q13586 685 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 SKOR2Q2VWA4 1001 aaPredicted RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 SCARA5Q6ZMJ2 495 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 CLEC20AQ6ZU45 233 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 SFTPA1Q8IWL2 248 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 BBS7Q8IWZ6 715 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 TXNDC5Q8NBS9 432 aaKnown RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 APOBEC3GQ9HC16 384 aaKnown RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 POLMQ9NP87 494 aaPredicted RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 TLR8Q9NR97 1041 aaKnown RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
CTSC-202ENST00000393301 MAN1B1Q9UKM7 699 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 USP3Q9Y6I4 520 aa13.04□□□□□ -0.32
CTSC-202ENST00000393301 PCDH15Q96QU1 1955 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 FAM208BQ5VWN6 2430 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 TULP3O75386 442 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 ABL1P00519 1130 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 CCDC130P13994 396 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 TRIM21P19474 475 aaKnown RBP13.03□□□□□ -0.32
CTSC-202ENST00000393301 BCKDHBP21953 392 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 PRCPP42785 496 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 PGFP49763 221 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 PSEN1P49768 467 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 VAMP7P51809 220 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 SEC13P55735 322 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 MAP7D1Q3KQU3 841 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 RNF43Q68DV7 783 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 ANO7Q6IWH7 933 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 Q6ZNB5 142 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 CCDC186Q7Z3E2 898 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 TTC39CQ8N584 583 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 WBP2Q969T9 261 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 TWNKQ96RR1 684 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 MED10Q9BTT4 135 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 EDEM2Q9BV94 578 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTSC-202ENST00000393301 FBXO10Q9UK96 956 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 HCN2Q9UL51 889 aa13.03□□□□□ -0.32
CTSC-202ENST00000393301 BICDL2A1A5D9 508 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 PMM2O15305 246 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 SLC16A3O15427 465 aaKnown RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 LETM1O95202 739 aaPredicted RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 KCNK5O95279 499 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 KLF8O95600 359 aaPredicted RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 CSRP1P21291 193 aaKnown RBP13.02□□□□□ -0.33
CTSC-202ENST00000393301 NR2F2P24468 414 aa13.02□□□□□ -0.33
CTSC-202ENST00000393301 ERCC5P28715 1186 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms