RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PCDH18Q9HCL0 1135 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZNF148Q9UQR1 794 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 NRP1O14786 923 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 TP73O15350 636 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 KRT14P02533 472 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 ATF2P15336 505 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 BDNFP23560 247 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 IL4RP24394 825 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 HSD17B3P37058 310 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 SULT1E1P49888 294 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 CAV1Q03135 178 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 DHX9Q08211 1270 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 TRIM60Q495X7 471 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 DCAF6Q58WW2 860 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZC3H12AQ5D1E8 599 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 OTUD1Q5VV17 481 aaPredicted RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 PSTKQ8IV42 348 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 BBOF1Q8ND07 529 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 IRGQQ8WZA9 623 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 HAUS1Q96CS2 278 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAF2Q96CS3 445 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZIM3Q96PE6 472 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 RNF157Q96PX1 679 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 SH3GL2Q99962 352 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 MRPL9Q9BYD2 267 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 RHOBTB2Q9BYZ6 727 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 PRG3Q9Y2Y8 225 aaPredicted RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 TADA2AO75478 443 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZBED1O96006 694 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 CDR1P51861 262 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 ATXN1P54253 815 aaKnown RBP11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 TLE2Q04725 743 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 UAP1Q16222 522 aaPredicted RBP11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 PM20D1Q6GTS8 502 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 RHBDF2Q6PJF5 856 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 RUFY1Q96T51 708 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZCWPW1Q9H0M4 648 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 GPATCH2LQ9NWQ4 482 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 ADAM28Q9UKQ2 775 aa11.93□□□□□ -0.5
SMARCAL1-203ENST00000392128 YJEFN3A6XGL0 299 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 E7ENQ6 273 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 OPA1O60313 960 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 FYNP06241 537 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 USP17L7P0C7H9 530 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 L1CAMP32004 1257 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 ADCY8P40145 1251 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 RABGGTBP53611 331 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 CCL23P55773 120 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 TRIP13Q15645 432 aaPredicted RBP11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 CA9Q16790 459 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 ANKRD20A8PQ5CZ79 823 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 LRIG3Q6UXM1 1119 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 HFE2Q6ZVN8 426 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 BHLHA9Q7RTU4 235 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 SPATA2LQ8IUW3 424 aaPredicted RBP11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 TMEM175Q9BSA9 504 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 PPP1R12CQ9BZL4 782 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 SAE1Q9UBE0 346 aaPredicted RBP11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 TBX21Q9UL17 535 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 AP4E1Q9UPM8 1137 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 LTFP02788 710 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 ALDH2P05091 517 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 PECAM1P16284 738 aaPredicted RBP11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 TGM2P21980 687 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 RDXP35241 583 aaKnown RBP11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 GATMP50440 423 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAM193AP78312 1265 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 SYPL2Q5VXT5 272 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC9A4Q6AI14 798 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 DCP1BQ8IZD4 617 aaKnown RBP11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 CCDC185Q8N715 623 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 PCDH9Q9HC56 1237 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 MARCH5Q9NX47 278 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 FZD10Q9ULW2 581 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 NAALADL1Q9UQQ1 740 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
SMARCAL1-203ENST00000392128 CAPN9O14815 690 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 MCF2LO15068 1137 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 CYP2C18P33260 490 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 ITGA8P53708 1063 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 MRPL58Q14197 206 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLMAPQ14BN4 828 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 NOMO1Q15155 1222 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 VARS2Q5ST30 1063 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 CTU1Q7Z7A3 348 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PQLC3Q8N755 202 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PGAP3Q96FM1 320 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 FUBP3Q96I24 572 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC9A7Q96T83 725 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 TMEM121Q9BTD3 319 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 TSPYL1Q9H0U9 437 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms