RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 GAD1Q99259 594 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PRRX2Q99811 253 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 BBS2Q9BXC9 721 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PXMP2Q9NR77 195 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PIK3C2AO00443 1686 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TCP11X1B4DZS4 312 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 M0QYT0 321 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PRPF4O43172 522 aaKnown RBP eCLIP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 RTN2O75298 545 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 USP1O94782 785 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SEC24DO94855 1032 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 DLGAP3O95886 979 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ENO1P06733 434 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 GNA15P30679 374 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PLA2G4AP47712 749 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SLC11A2P49281 568 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ALDH18A1P54886 795 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 USP4Q13107 963 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 OLFML2BQ68BL8 750 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 LVRNQ6Q4G3 990 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SPATA4Q8NEY3 305 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NSL1Q96IY1 281 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SH3GL1Q99961 368 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 FAM213AQ9BRX8 229 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 OSBPL8Q9BZF1 889 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NDFIP2Q9NV92 336 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 HEY1Q9Y5J3 304 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 AHDC1Q5TGY3 1603 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PDGFRBP09619 1106 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 MYL2P10916 166 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 RGS4P49798 205 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TMEM270Q6UE05 265 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 C16orf59Q7L2K0 433 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ARMCX6Q7L4S7 300 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 MAGED4Q96JG8 741 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PDLIM2Q96JY6 352 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NECTIN4Q96NY8 510 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PGLYRP2Q96PD5 576 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 HEMGNQ9BXL5 484 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ARHGAP39Q9C0H5 1083 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SENP2Q9HC62 589 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 GRID1Q9ULK0 1009 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SNX12Q9UMY4 172 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 FAM170AA1A519 330 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 CCT8L1PA6NM43 557 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 O00370 1275 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ATP1A1P05023 1023 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 LGALS2P05162 132 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 FSHRP23945 695 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 MAPK1P28482 360 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NCKAP1LP55160 1127 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 RBP5P82980 135 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 CDK17Q00537 523 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ITIH4Q14624 930 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TAS2R42Q7RTR8 314 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 GRAMD1CQ8IYS0 662 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NRSN1Q8IZ57 195 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 RFWD2Q8NHY2 731 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 DNAJC7Q99615 494 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 UNC45AQ9H3U1 944 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 EXO5Q9H790 373 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TLR9Q9NR96 1032 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ENOPH1Q9UHY7 261 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SFI1A8K8P3 1242 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 NPM3O75607 178 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ATP1A3P13637 1013 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 TAF6P49848 677 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ARSEP51690 589 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 VAMP7P51809 220 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 NRLP54845 237 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PPP4CP60510 307 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 UBE3AQ05086 875 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 KDSRQ06136 332 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SBK1Q52WX2 424 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 HERC6Q8IVU3 1022 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 KRT78Q8N1N4 520 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 LENG1Q96BZ8 264 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PLEKHF1Q96S99 279 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SPATA16Q9BXB7 569 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ALDH8A1Q9H2A2 487 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PCDHAC2Q9Y5I4 1007 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 MAGEC1O60732 1142 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CHN1P15882 459 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PLCL1Q15111 1095 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CRY2Q49AN0 593 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CCNJLQ8IV13 435 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 RTL3Q8N8U3 475 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 OR6P1Q8NGX9 317 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 DIS3LQ8TF46 1054 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ING5Q8WYH8 240 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 RNF25Q96BH1 459 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ARHGEF26Q96DR7 871 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 MXRA8Q9BRK3 442 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 RTFDC1Q9BY42 306 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 NMRK1Q9NWW6 199 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 MKL2Q9ULH7 1088 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CHMP2BQ9UQN3 213 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 DTNAQ9Y4J8 743 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SNCAIPQ9Y6H5 919 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 KIF20BQ96Q89 1820 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms