RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SEC24CP53992 1094 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 RCN1Q15293 331 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 KCNT1Q5JUK3 1230 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 BLOC1S5Q8TDH9 187 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 KAT2BQ92831 832 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 TSEN34Q9BSV6 310 aaKnown RBP14.77□□□□□ -0.04
TRAF1-201ENST00000373887 KRCC1Q9NPI7 259 aaPredicted RBP14.77□□□□□ -0.04
TRAF1-201ENST00000373887 MRPL39Q9NYK5 338 aaKnown RBP14.77□□□□□ -0.04
TRAF1-201ENST00000373887 GRID1Q9ULK0 1009 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 PCDHB2Q9Y5E7 798 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 CDY2AQ9Y6F7 541 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 CDY1Q9Y6F8 540 aa14.77□□□□□ -0.04
TRAF1-201ENST00000373887 PIPSLA2A3N6 862 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 PDZK1P1A8MUH7 402 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 F5H5T6 163 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 OGTO15294 1046 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 EIF2S1P05198 315 aaKnown RBP14.77□□□□□ -0.05
TRAF1-201ENST00000373887 GPC1P35052 558 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 KCNJ1P48048 391 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 CLEC16AQ2KHT3 1053 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 HDHD2Q9H0R4 259 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 INTS13Q9NVM9 706 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 SYBUQ9NX95 663 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.77□□□□□ -0.05
TRAF1-201ENST00000373887 RPS6KB2Q9UBS0 482 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 TK2O00142 265 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 TSPAN3O60637 253 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 ALDH5A1P51649 535 aaPredicted RBP14.77□□□□□ -0.05
TRAF1-201ENST00000373887 JAMLQ86YT9 394 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 GMCL1Q96IK5 515 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 EIF3LQ9Y262 564 aaKnown RBP14.77□□□□□ -0.05
TRAF1-201ENST00000373887 CST8O60676 142 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 LSP1P33241 339 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 VHLP40337 213 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 USP50Q70EL3 339 aaPredicted RBP14.77□□□□□ -0.05
TRAF1-201ENST00000373887 SGSM3Q96HU1 749 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 PAK5Q9P286 719 aa14.77□□□□□ -0.05
TRAF1-201ENST00000373887 COL5A2P05997 1499 aaPredicted RBP14.77□□□□□ -0.05
TRAF1-201ENST00000373887 SLC12A8A0AV02 714 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 DYTNA2CJ06 578 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 H2AFYO75367 372 aaKnown RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ZCCHC18P0CG32 403 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ATP6V1B2P21281 511 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 RRM2P31350 389 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 SREBF1P36956 1147 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 FXR1P51114 621 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 EPHB3P54753 998 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 NCKAP1LP55160 1127 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ACVR2BQ13705 512 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 RDM1Q8NG50 284 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 PDCD2LQ9BRP1 358 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 CHST12Q9NRB3 414 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 DNAJC3Q13217 504 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 PTK6Q13882 451 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 KRT35Q92764 455 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 KCNB2Q92953 911 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ZIM3Q96PE6 472 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 PURBQ96QR8 312 aaKnown RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 MAP3K14Q99558 947 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 SLURP2P0DP57 97 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 SARSP49591 514 aaKnown RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 LAMB3Q13751 1172 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 PHKG1Q16816 387 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 DACT2Q5SW24 774 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 METTL7BQ6UX53 244 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 DENND5BQ6ZUT9 1274 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ZNF189O75820 626 aaPredicted RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 FSCN1Q16658 493 aaKnown RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ARMCX4Q5H9R4 360 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ANKS6Q68DC2 871 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ST13P5Q8NFI4 369 aaPredicted RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 CFAP99D6REC4 459 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ZNF682O95780 498 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 AKR1A1P14550 325 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 AKIRIN2Q53H80 203 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 AGBL2Q5U5Z8 902 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 RSBN1Q5VWQ0 802 aaPredicted RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 ARID3BQ8IVW6 561 aaPredicted RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 C19orf18Q8NEA5 215 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 OMA1Q96E52 524 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 FAM111AQ96PZ2 611 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 OSBPL8Q9BZF1 889 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 BATF3Q9NR55 127 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 SMPD4Q9NXE4 827 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 TRMT6Q9UJA5 497 aaKnown RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 RUVBL2Q9Y230 463 aaKnown RBP14.76□□□□□ -0.05
TRAF1-201ENST00000373887 SNX13Q9Y5W8 968 aa14.76□□□□□ -0.05
TRAF1-201ENST00000373887 TMEM191CA6NGB0 347 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 PCNAP12004 261 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 OTUD4Q01804 1114 aaKnown RBP14.75□□□□□ -0.05
TRAF1-201ENST00000373887 PDK1Q15118 436 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 DGKKQ5KSL6 1271 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 FAM171A1Q5VUB5 890 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 SPIRE2Q8WWL2 714 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 DISP2A7MBM2 1401 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 FAM205AQ6ZU69 1335 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 TRPC5OSA6NMA1 111 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 GUCA1AP43080 201 aaPredicted RBP14.75□□□□□ -0.05
TRAF1-201ENST00000373887 KLHDC7AQ5VTJ3 777 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 CACHD1Q5VU97 1274 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms