RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TRPC7Q9HCX4 862 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 DNAJC16Q9Y2G8 782 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 KRT6AP02538 564 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 KRT6BP04259 564 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 KRT6CP48668 564 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 AAR2Q9Y312 384 aaKnown RBP14.65□□□□□ -0.06
LMX1B-202ENST00000373474 SLC12A3P55017 1021 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 WASHC2DQ5SRD0 308 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 FAM45BPQ6NSW5 357 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 MAGED4Q96JG8 741 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 ZFP42Q96MM3 310 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 MUC3BQ9H195 1237 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 TMX2Q9Y320 296 aa14.65□□□□□ -0.06
LMX1B-202ENST00000373474 DPYSL4O14531 572 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 SNX31Q8N9S9 440 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 WDCPQ9H6R7 721 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 EVPLLA8MZ36 301 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 CYP2C9P11712 490 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 OASLQ15646 514 aaKnown RBP14.64□□□□□ -0.07
LMX1B-202ENST00000373474 ZNF484Q5JVG2 852 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 BNC2Q6ZN30 1099 aaPredicted RBP14.64□□□□□ -0.07
LMX1B-202ENST00000373474 NMD3Q96D46 503 aaKnown RBP14.64□□□□□ -0.07
LMX1B-202ENST00000373474 LRRC40Q9H9A6 602 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 RGS4P49798 205 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 UBE2OQ9C0C9 1292 aaKnown RBP14.64□□□□□ -0.07
LMX1B-202ENST00000373474 ZNF446Q9NWS9 450 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 SHOC2Q9UQ13 582 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 LRRC10BA6NIK2 292 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 CYBBP04839 570 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 VIL1P09327 827 aaKnown RBP14.64□□□□□ -0.07
LMX1B-202ENST00000373474 FCGR1AP12314 374 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 CACNA2D1P54289 1103 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 SHCBP1LQ9BZQ2 653 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 EFCAB1Q9HAE3 211 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 COPG2Q9UBF2 871 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 CTNNAL1Q9UBT7 734 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 TNS2Q63HR2 1409 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 SOAT2O75908 522 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 PDE9AO76083 593 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 SERPINH1P50454 418 aaKnown RBP14.64□□□□□ -0.07
LMX1B-202ENST00000373474 NFIAQ12857 509 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 PDPK2PQ6A1A2 396 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 SLFN11Q7Z7L1 901 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 OR8H2Q8N162 312 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 EIF1ADQ8N9N8 165 aaKnown RBP14.64□□□□□ -0.07
LMX1B-202ENST00000373474 MCRS1Q96EZ8 462 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 ARHGEF3Q9NR81 526 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 CISHQ9NSE2 258 aa14.64□□□□□ -0.07
LMX1B-202ENST00000373474 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-202ENST00000373474 BCL10O95999 233 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 CTSHP09668 335 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 ZCCHC18P0CG32 403 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 EPHB2P29323 1055 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 ARMC4Q5T2S8 1044 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 PTRHD1Q6GMV3 140 aaKnown RBP14.63□□□□□ -0.07
LMX1B-202ENST00000373474 TMEM176AQ96HP8 235 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 NAT9Q9BTE0 207 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 BLOC1S4Q9NUP1 217 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 NINJ2Q9NZG7 142 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 DDX3XO00571 662 aaKnown RBP eCLIP14.63□□□□□ -0.07
LMX1B-202ENST00000373474 SNPHO15079 494 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 ETFBP38117 255 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 C16orf72Q14CZ0 275 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 IKBIPQ70UQ0 350 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 LPCAT2Q7L5N7 544 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 IARS2Q9NSE4 1012 aaKnown RBP14.63□□□□□ -0.07
LMX1B-202ENST00000373474 GPATCH2LQ9NWQ4 482 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 TATDN2Q93075 761 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 MPP4Q96JB8 637 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 KLHL20Q9Y2M5 609 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 FAM58BPP0C7Q3 252 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 ACOT1Q86TX2 421 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 TSEN2Q8NCE0 465 aaKnown RBP14.63□□□□□ -0.07
LMX1B-202ENST00000373474 GGA3Q9NZ52 723 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 C6orf203Q9P0P8 240 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-202ENST00000373474 HACL1Q9UJ83 578 aa14.63□□□□□ -0.07
LMX1B-202ENST00000373474 LSM7Q9UK45 103 aaKnown RBP14.63□□□□□ -0.07
LMX1B-202ENST00000373474 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SLCO1B7G3V0H7 640 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 H7C0S8 307 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 ATP9AO75110 1047 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 ATXN8OSP0DMR3 200 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 ODC1P11926 461 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 KRT20P35900 424 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 TALDO1P37837 337 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 NCF4Q15080 339 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 TTMPQ5BVD1 217 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SEL1L3Q68CR1 1132 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SV2AQ7L0J3 742 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SLC5A5Q92911 643 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 DEFB129Q9H1M3 183 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 CYP3A43Q9HB55 503 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 VPS9D1Q9Y2B5 631 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 CENPXA8MT69 81 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 STAG3L1P0CL83 205 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 HOXD10P28358 340 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 GMPSP49915 693 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 UGT3A1Q6NUS8 523 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PPP2R3CQ969Q6 453 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms