RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 C2CD2Q9Y426 696 aa11.31□□□□□ -0.6
LCN2-202ENST00000372998 COL4A5P29400 1685 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 COL1A2P08123 1366 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 WDR91A4D1P6 747 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 M0QYV0 167 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 HGSO14964 777 aaPredicted RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 H2AFYO75367 372 aaKnown RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 KRT19P08727 400 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 CCDC130P13994 396 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 IL1R2P27930 398 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 SERPINB3P29508 390 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 SDC4P31431 198 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 HSPA1LP34931 641 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 TNFSF9P41273 254 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 GPD2P43304 727 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 GDF10P55107 478 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 TMPRSS15P98073 1019 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 SP2Q02086 613 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 STX3Q13277 289 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 RCN1Q15293 331 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 CCDC14Q49A88 953 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 ZNF394Q53GI3 561 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 HP1BP3Q5SSJ5 553 aaPredicted RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 SNX30Q5VWJ9 437 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 TXNRD3NBQ6F5E7 133 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 PPM1NQ8N819 430 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 PPP1R14CQ8TAE6 165 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 PPP4R1Q8TF05 950 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 ELMO3Q96BJ8 720 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 HEXIM2Q96MH2 286 aaKnown RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 CPXM1Q96SM3 734 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 EBNA1BP2Q99848 306 aaKnown RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 SH3GL3Q99963 347 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 NT5C1AQ9BXI3 368 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 EIF2B3Q9NR50 452 aaKnown RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.3□□□□□ -0.6
LCN2-202ENST00000372998 MRGBPQ9NV56 204 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 ARL8BQ9NVJ2 186 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 NKX1-2Q9UD57 310 aaPredicted RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 PCSK1NQ9UHG2 260 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 APOBEC2Q9Y235 224 aaKnown RBP11.3□□□□□ -0.6
LCN2-202ENST00000372998 TTLL3Q9Y4R7 772 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
LCN2-202ENST00000372998 LRRC37A2A6NM11 1700 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 A6NJR5 290 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 FAM159BA6NKW6 160 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 AP3B1O00203 1094 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 KCNN4O15554 427 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 TM7SF2O76062 418 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 FESP07332 822 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 BPGMP07738 259 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 BGNP21810 368 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 PRDX6P30041 224 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
LCN2-202ENST00000372998 PTPN9P43378 593 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 ACADSBP45954 432 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 CDK7P50613 346 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
LCN2-202ENST00000372998 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 SMTNL2Q2TAL5 461 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
LCN2-202ENST00000372998 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 TRIM68Q6AZZ1 485 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 OR6B2Q6IFH4 312 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 LBX2Q6XYB7 198 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 SCARA5Q6ZMJ2 495 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 MARK2Q7KZI7 788 aaKnown RBP11.29□□□□□ -0.6
LCN2-202ENST00000372998 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 SCUBE1Q8IWY4 988 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 PLD5Q8N7P1 536 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 DEPDC1BQ8WUY9 529 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 RXFP2Q8WXD0 754 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 STON2Q8WXE9 905 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 CFAP36Q96G28 342 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 PCYT2Q99447 389 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 CDT1Q9H211 546 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 KCNK13Q9HB14 408 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 POPDC2Q9HBU9 364 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 TAS2R1Q9NYW7 299 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 MORF4L1Q9UBU8 362 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 AFG3L2Q9Y4W6 797 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 RAD54BQ9Y620 910 aa11.29□□□□□ -0.6
LCN2-202ENST00000372998 RALGAPA2Q2PPJ7 1873 aa11.28□□□□□ -0.6
LCN2-202ENST00000372998 B2RBV5 119 aa11.28□□□□□ -0.6
LCN2-202ENST00000372998 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
LCN2-202ENST00000372998 CAPN9O14815 690 aa11.28□□□□□ -0.6
LCN2-202ENST00000372998 SNNO75324 88 aaPredicted RBP11.28□□□□□ -0.6
LCN2-202ENST00000372998 ENTPD5O75356 428 aa11.28□□□□□ -0.6
LCN2-202ENST00000372998 DPEP1P16444 411 aa11.28□□□□□ -0.6
LCN2-202ENST00000372998 AOC1P19801 751 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms