RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 FBXL18Q96ME1 805 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 THAP9Q9H5L6 903 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 FAM124BQ9H5Z6 455 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 ARFGAP3Q9NP61 516 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CCDC177Q9NQR7 707 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 KLHL9Q9P2J3 617 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 VPS28Q9UK41 221 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PCDHB5Q9Y5E4 795 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PMS2P1A4D2B8 440 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 DVL2O14641 736 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TNFRSF10CO14798 259 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 FFAR2O15552 330 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MTSS1O43312 755 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 PPIP5K2O43314 1243 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TXNL1O43396 289 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SLC37A4O43826 429 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 FAM189A1O60320 539 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 RECQL4O94761 1208 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ASNSP08243 561 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 JUNDP17535 347 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CCNA2P20248 432 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 C5AR1P21730 350 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CNTFP26441 200 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ZNF143P52747 638 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 PLTPP55058 493 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CASP6P55212 293 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MXD4Q14582 209 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 ZNF674Q2M3X9 581 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MIIPQ5JXC2 388 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SPATA46Q5T0L3 261 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 OLFML1Q6UWY5 402 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 LIMS2Q7Z4I7 341 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MTDHQ86UE4 582 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 BPHLQ86WA6 291 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 ZNF687Q8N1G0 1237 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MB21D1Q8N884 522 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SYT2Q8N9I0 419 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 SYN2Q92777 582 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 GAL3ST3Q96A11 431 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 C18orf8Q96DM3 657 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 VPS39Q96JC1 886 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MSLNLQ96KJ4 702 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 C16orf45Q96MC5 204 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 CITED2Q99967 270 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 ITPAQ9BY32 194 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 IRX2Q9BZI1 471 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 SH2D4AQ9H788 454 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 VPS37BQ9H9H4 285 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TUBD1Q9UJT1 453 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 APPL1Q9UKG1 709 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 KCNH3Q9ULD8 1083 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MYO6Q9UM54 1294 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 DTNAQ9Y4J8 743 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 V9GYY5 206 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 KDM3AQ9Y4C1 1321 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 C1QTNF9BB2RNN3 333 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 B4DLN1 442 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 F8W8V4 182 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SART1O43290 800 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 RIPK2O43353 540 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ULK1O75385 1050 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 DLGAP3O95886 979 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 LRG1P02750 347 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 APOA4P06727 396 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ITGA5P08648 1049 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CLTBP09497 229 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ANXA13P27216 316 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 PTGER3P43115 390 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 HAAOP46952 286 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ZNF165P49910 485 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 YARSP54577 528 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 NCKAP1LP55160 1127 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 BACE1P56817 501 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 MORF4L2Q15014 288 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CNN3Q15417 329 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 BCL2A1Q16548 175 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 DPYSL2Q16555 572 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 DOK7Q18PE1 504 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ZNF365Q70YC5 407 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 RABEPKQ7Z6M1 372 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SLFN11Q7Z7L1 901 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 GDAP1Q8TB36 358 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 GOLGA5Q8TBA6 731 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SNX29Q8TEQ0 813 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TEKT4Q8WW24 435 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TBC1D5Q92609 795 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 RAD54LQ92698 747 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 NECAB3Q96P71 396 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 ERGIC2Q96RQ1 377 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TWNKQ96RR1 684 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TXN2Q99757 166 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SDF4Q9BRK5 362 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ISCUQ9H1K1 167 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TMEM8AQ9HCN3 771 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 DNAJB9Q9UBS3 223 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ADD3Q9UEY8 706 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 PIN4Q9Y237 131 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 SLC27A5Q9Y2P5 690 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TRAV20A0A0B4J274 112 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ERICH2A1L162 156 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms