RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 RPL10AP62906 217 aaKnown RBP15.76■□□□□ 0.11
LMO4-201ENST00000370542 PAK1Q13153 545 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 LRRC32Q14392 662 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 PPP2R5DQ14738 602 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 DUOXA2Q1HG44 320 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 BMT2Q1RMZ1 405 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 GPIHBP1Q8IV16 184 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 WDR49Q8IV35 697 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 NOA1Q8NC60 698 aaKnown RBP15.76■□□□□ 0.11
LMO4-201ENST00000370542 C3orf20Q8ND61 904 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 USP13Q92995 863 aaPredicted RBP15.76■□□□□ 0.11
LMO4-201ENST00000370542 CHFRQ96EP1 664 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 ANKRD36BP1Q96IX9 119 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 CEP295NLQ96MC4 621 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 GCNAQ96QF7 691 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 RUFY1Q96T51 708 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 DNAJC7Q99615 494 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 PI4K2AQ9BTU6 479 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 KIF9Q9HAQ2 790 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 UXTQ9UBK9 157 aaPredicted RBP15.76■□□□□ 0.11
LMO4-201ENST00000370542 RNF14Q9UBS8 474 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 GTF3C4Q9UKN8 822 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 LUC7L2Q9Y383 392 aaKnown RBP15.76■□□□□ 0.11
LMO4-201ENST00000370542 FAM169AQ9Y6X4 670 aa15.76■□□□□ 0.11
LMO4-201ENST00000370542 GREB1Q4ZG55 1949 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 K7ESF4 209 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 ACAT1P24752 427 aaKnown RBP15.75■□□□□ 0.11
LMO4-201ENST00000370542 CDR1P51861 262 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 KPNA1P52294 538 aaPredicted RBP15.75■□□□□ 0.11
LMO4-201ENST00000370542 SATB1Q01826 763 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 TNK2Q07912 1038 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 BFSP1Q12934 665 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 MYO1EQ12965 1108 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 KRT31Q15323 416 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 TAF12Q16514 161 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 ITPRIPL2Q3MIP1 535 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 FAM26FQ5R3K3 315 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 EMC10Q5UCC4 262 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 UNC13DQ70J99 1090 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 TAX1BP1Q86VP1 789 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 CCDC50Q8IVM0 306 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 C12orf56Q8IXR9 622 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 ADGRF2Q8IZF7 708 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 ACRBPQ8NEB7 543 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 RIN3Q8TB24 985 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 TMEM174Q8WUU8 243 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 CPLX3Q8WVH0 158 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 SCFD1Q8WVM8 642 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.75■□□□□ 0.11
LMO4-201ENST00000370542 HPDLQ96IR7 371 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 MED15Q96RN5 788 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 SH3GL2Q99962 352 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 SELENOOQ9BVL4 669 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 HPS4Q9NQG7 708 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 TDP1Q9NUW8 608 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 THG1LQ9NWX6 298 aaKnown RBP15.75■□□□□ 0.11
LMO4-201ENST00000370542 CAPN11Q9UMQ6 739 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 CCL26Q9Y258 94 aa15.75■□□□□ 0.11
LMO4-201ENST00000370542 ANAPC1Q9H1A4 1944 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 PVALEFA0A1B0GWK0 134 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 CLGNO14967 610 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 HCRTO43612 131 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 HSF2BPO75031 334 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 FSBPO95073 299 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 STAU1O95793 577 aaKnown RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 KRT19P08727 400 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 TCF3P15923 654 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 WARSP23381 471 aaKnown RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 SNRNP35Q16560 246 aaKnown RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 DDR2Q16832 855 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 CCDC142Q17RM4 750 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 TCP11X2Q5H9J9 407 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 CCDC122Q5T0U0 273 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 ZNF658Q5TYW1 1059 aaPredicted RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 LMBRD2Q68DH5 695 aaPredicted RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 TXNDC8Q6A555 127 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 FOXR1Q6PIV2 292 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 KIAA1328Q86T90 577 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 FAM114A1Q8IWE2 563 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 MAB21L3Q8N8X9 362 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 AENQ8WTP8 325 aaKnown RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 MRPS31Q92665 395 aaKnown RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 CAVIN3Q969G5 261 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 SPATA17Q96L03 361 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 SMG9Q9H0W8 520 aaKnown RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 THAP9Q9H5L6 903 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 GKN1Q9NS71 199 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 RBM12Q9NTZ6 932 aaKnown RBP15.74■□□□□ 0.11
LMO4-201ENST00000370542 CDH9Q9ULB4 789 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 PTPRDP23468 1912 aa15.74■□□□□ 0.11
LMO4-201ENST00000370542 OTOL1A6NHN0 477 aaPredicted RBP15.73■□□□□ 0.11
LMO4-201ENST00000370542 KCNJ18B7U540 433 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 TRDMT1O14717 391 aaKnown RBP15.73■□□□□ 0.11
LMO4-201ENST00000370542 PHACTR2O75167 634 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 TACC1O75410 805 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 CST3P01034 146 aaPredicted RBP15.73■□□□□ 0.11
LMO4-201ENST00000370542 TNNC2P02585 160 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 ATXN8OSP0DMR3 200 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 TCP1P17987 556 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms