RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 KREMEN2Q8NCW0 462 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 GIPC2Q8TF65 315 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 FAM172AQ8WUF8 416 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 ARNTL2Q8WYA1 636 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 NDRG1Q92597 394 aaKnown RBP12.87□□□□□ -0.35
TUBE1-202ENST00000368662 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-202ENST00000368662 TIFAQ96CG3 184 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 TRMT2BQ96GJ1 504 aaKnown RBP12.87□□□□□ -0.35
TUBE1-202ENST00000368662 PBKQ96KB5 322 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 MYRFLQ96LU7 910 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 CARD9Q9H257 536 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 CLIC5Q9NZA1 410 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 UXTQ9UBK9 157 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-202ENST00000368662 KCNK3O14649 394 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 LRG1P02750 347 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 KRT7P08729 469 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 IRS1P35568 1242 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 PPP3CCP48454 512 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 RWDD2BP57060 319 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 USP46P62068 366 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 TWF1Q12792 350 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 PTPROQ16827 1216 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 HFE2Q6ZVN8 426 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 PRO3102Q9H379 93 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 DDX3YO15523 660 aaKnown RBP12.86□□□□□ -0.35
TUBE1-202ENST00000368662 F9P00740 461 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 FYNP06241 537 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 RALAP11233 206 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 SULT1E1P49888 294 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 ATP11AP98196 1134 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 CDO1Q16878 200 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-202ENST00000368662 ELMOD1Q8N336 334 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 SLC7A14Q8TBB6 771 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 PSMG2Q969U7 264 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 PGAP3Q96FM1 320 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-202ENST00000368662 CDK5RAP1Q96SZ6 601 aaKnown RBP12.86□□□□□ -0.35
TUBE1-202ENST00000368662 NPY6RQ99463 290 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 CERS4Q9HA82 394 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 OLA1Q9NTK5 396 aaKnown RBP12.86□□□□□ -0.35
TUBE1-202ENST00000368662 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
TUBE1-202ENST00000368662 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 MAGED2Q9UNF1 606 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-202ENST00000368662 NAALADL1Q9UQQ1 740 aa12.86□□□□□ -0.35
TUBE1-202ENST00000368662 A0A1W2PQH9 124 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 PRPSAP2O60256 369 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 ENDOD1O94919 500 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 CSPG5O95196 566 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 C8AP07357 584 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 GBP1P32455 592 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 PEX5P50542 639 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 DNA2P51530 1060 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 TAF10Q12962 218 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 CLUL1Q15846 466 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 SYPL2Q5VXT5 272 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 TADA2BQ86TJ2 420 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 RNF139Q8WU17 664 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 TBCBQ99426 244 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 USP18Q9UMW8 372 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 MRFAP1Q9Y605 127 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 PLXNA3P51805 1871 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 M0QYT0 321 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 MIPP30301 263 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
TUBE1-202ENST00000368662 SLC25A11Q02978 314 aaKnown RBP12.85□□□□□ -0.35
TUBE1-202ENST00000368662 WHAMMP3Q1A5X7 153 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 BOLA3Q53S33 107 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 SNX30Q5VWJ9 437 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 SND1Q7KZF4 910 aaKnown RBP eCLIP12.85□□□□□ -0.35
TUBE1-202ENST00000368662 SCD5Q86SK9 330 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 KATNAL2Q8IYT4 538 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 ZNF276Q8N554 614 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 ARFGAP1Q8N6T3 406 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 EDEM1Q92611 657 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 L2HGDHQ9H9P8 463 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 GMIPQ9P107 970 aa12.85□□□□□ -0.35
TUBE1-202ENST00000368662 COL4A4P53420 1690 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 ZDHHC11BP0C7U3 371 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 HOXA9P31269 272 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 CETN2P41208 172 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 AIF1P55008 147 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 HDAC4P56524 1084 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 TAS2R40P59535 323 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 MLLT1Q03111 559 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 DEUP1Q05D60 604 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms