RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PCDHGC3Q9UN70 934 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 SORCS3Q9UPU3 1222 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 R3HDM2Q9Y2K5 976 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 TTLL3Q9Y4R7 772 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PHLPP1O60346 1717 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 TSC22D2O75157 780 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 CYP1A1P04798 512 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ITGB3P05106 788 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 IL10P22301 178 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 NR2C2P49116 596 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 HDDC2Q7Z4H3 204 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 RIOX2Q8IUF8 465 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 RNF217Q8TC41 542 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 LBHD1Q9BQE6 289 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 FETUBQ9UGM5 382 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZNF839A8K0R7 811 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 M0R3G1 203 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 CXCL11O14625 94 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 NKRFO15226 690 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 HMOX2P30519 316 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZNF135P52742 658 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 MYL6P60660 151 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PTPN11Q06124 597 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 MAMLD1Q13495 774 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 SLC12A1Q13621 1099 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ATP1A4Q13733 1029 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZC3H12BQ5HYM0 836 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 SPOPLQ6IQ16 392 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 LRRC8EQ6NSJ5 796 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ST13P5Q8NFI4 369 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 TMEM174Q8WUU8 243 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ASZ1Q8WWH4 475 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PCDHB18PQ96TA0 734 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PRPF18Q99633 342 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 SSU72Q9NP77 194 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZDHHC18Q9NUE0 388 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 KLHL11Q9NVR0 708 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 C6orf203Q9P0P8 240 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 USP18Q9UMW8 372 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 NOD1Q9Y239 953 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ROBO1Q9Y6N7 1651 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 HACD1B0YJ81 288 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ALDH18A1P54886 795 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 CDK16Q00536 496 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 UBE3AQ05086 875 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 EN1Q05925 392 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PREPLQ4J6C6 727 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 CDR2LQ86X02 465 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 CCDC117Q8IWD4 279 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 AKT1S1Q96B36 256 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 SLITRK1Q96PX8 696 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 EPAS1Q99814 870 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 MAGEB5Q9BZ81 275 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 MTMR12Q9C0I1 747 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 DPP3Q9NY33 737 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 AP4S1Q9Y587 144 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 POLBP06746 335 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PEX5P50542 639 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PRAMEP78395 509 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ELF3P78545 371 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 OCRLQ01968 901 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 TRIP10Q15642 601 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 ANGEL2Q5VTE6 544 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PID1Q7Z2X4 250 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 LRRC15Q8TF66 581 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 NCLNQ969V3 563 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 VPS39Q96JC1 886 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 PAFAH2Q99487 392 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 LGALS13Q9UHV8 139 aa5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 NOCTQ9UK39 431 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-204ENST00000366767 FKBP6O75344 327 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 CAPN15O75808 1086 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 DDHD2O94830 711 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 KRT6AP02538 564 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 KRT6BP04259 564 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 SHBGP04278 402 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 KRT6CP48668 564 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 LAMTOR4Q0VGL1 99 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 RCN1Q15293 331 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 PLPPR4Q7Z2D5 763 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 CROCCP3Q8IVE0 287 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 GALNT4Q8N4A0 578 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 CYGBQ8WWM9 190 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 SEC14L1Q92503 715 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 SLC13A1Q9BZW2 595 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 ATAD3AQ9NVI7 634 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 EURLQ9NYK6 297 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 ARHGAP28Q9P2N2 729 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 BARX2Q9UMQ3 279 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 COG5Q9UP83 839 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 LAMA4Q16363 1823 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 APRTP07741 180 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 GLRA2P23416 452 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 KDELR1P24390 212 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 KDSRQ06136 332 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 PDK4Q16654 411 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 PARP6Q2NL67 630 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 POTEAQ6S8J7 498 aa5.54□□□□□ -1.52
CDC42BPA-204ENST00000366767 ABHD15Q6UXT9 468 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms