RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DMP1Q13316 513 aaPredicted RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 UBAP2LQ14157 1087 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 CNGA3Q16281 694 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 MSS51Q4VC12 460 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 BRDTQ58F21 947 aaPredicted RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 RABGAP1LQ5R372 815 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SYCP2LQ5T4T6 812 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 POTEHQ6S545 545 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 LDHDQ86WU2 507 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 RHPN2Q8IUC4 686 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 PALM2Q8IXS6 379 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SLC15A3Q8IY34 581 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 GPD1LQ8N335 351 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 NAT8LQ8N9F0 302 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 RIN3Q8TB24 985 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 C17orf50Q8WW18 174 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 APBB2Q92870 758 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 HNRNPABQ99729 332 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SPATA7Q9P0W8 599 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 IP6K2Q9UHH9 426 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 TRPC5Q9UL62 973 aaPredicted RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 TDRKHQ9Y2W6 561 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 PLLPQ9Y342 182 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 AP4B1Q9Y6B7 739 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 A0A0B4J269 797 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 H3BSA7 217 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 MATN2O00339 956 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ITM2AO43736 263 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ADCY3O60266 1144 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 INHBAP08476 426 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ALOX15P16050 662 aaPredicted RBP10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 FUT4P22083 530 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 L1CAMP32004 1257 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 EPHB1P54762 984 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 KRT76Q01546 638 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 PFKPQ01813 784 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 FAAP100Q0VG06 881 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 TUBB3Q13509 450 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 TKFCQ3LXA3 575 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 RALGPS1Q5JS13 557 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 SLC30A10Q6XR72 485 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 TICAM1Q8IUC6 712 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CPT1BQ92523 772 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ITPKCQ96DU7 683 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 RILPQ96NA2 401 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 PRPF18Q99633 342 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CCT7Q99832 543 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 HAUS8Q9BT25 410 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 PARVAQ9NVD7 372 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CNTN6Q9UQ52 1028 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 EFR3BQ9Y2G0 817 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 IKBKGQ9Y6K9 419 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 GOLGA8IPA6NC78 632 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 GOLGA8JA6NMD2 632 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 WDR64B1ANS9 1081 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 GOLGA8SH3BPF8 625 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 GOLGA8MH3BSY2 632 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 SGK1O00141 431 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ICAM1P05362 532 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ZNF23P17027 643 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ECE1P42892 770 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 NPTX2P47972 431 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ALDH3B2P48448 385 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CACNB3P54284 484 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 JAG1P78504 1218 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 TAP1Q03518 808 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 RELAQ04206 551 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CHI3L2Q15782 390 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 RARS2Q5T160 578 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CES4AQ5XG92 561 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ABRAQ8N0Z2 381 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 FBXW8Q8N3Y1 598 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 ADCY4Q8NFM4 1077 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CCDC127Q96BQ5 260 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 CSRNP1Q96S65 589 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 SLC2A11Q9BYW1 496 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 OSBPL6Q9BZF3 934 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 NRDE2Q9H7Z3 1164 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 GINM1Q9NU53 330 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 DDX56Q9NY93 547 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 TCEAL9Q9UHQ7 104 aa10.7□□□□□ -0.7
CHRNA1-202ENST00000348749 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 HTR3EA5X5Y0 456 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 SPAG6O75602 509 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 PIAS1O75925 651 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 CAPNS1P04632 268 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 KRT10P13645 584 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 TAL1P17542 331 aaPredicted RBP10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 TBXAS1P24557 533 aaPredicted RBP10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 NUP107P57740 925 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 UBXN2AP68543 259 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 NOMO3P69849 1222 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 GAD2Q05329 585 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms