RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PODXLO00592 558 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 N4BP3O15049 544 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 GJB6O95452 261 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 CYP17A1P05093 508 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 CYP3A4P08684 503 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 SFNP31947 248 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 GRIA2P42262 883 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 GRIA4P48058 902 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 JAK3P52333 1124 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 NLRP12P59046 1061 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 ASIC1P78348 528 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 DPYDQ12882 1025 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 KIAA1324Q6UXG2 1013 aaKnown RBP12.1□□□□□ -0.47
ATXN3-201ENST00000340660 HEATR3Q7Z4Q2 680 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 MON1AQ86VX9 555 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 SAP25Q8TEE9 199 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 LENG9Q96B70 501 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 SLC46A1Q96NT5 459 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 TM9SF3Q9HD45 589 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 STARD13Q9Y3M8 1113 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 FBN1P35555 2871 aaKnown RBP12.1□□□□□ -0.47
ATXN3-201ENST00000340660 TTC41PQ6P2S7 1318 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 CDRT15L2A8MXV6 281 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 ASAP2O43150 1006 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 LUC7L3O95232 432 aaKnown RBP12.09□□□□□ -0.47
ATXN3-201ENST00000340660 CKMT2P17540 419 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 GNLYP22749 145 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 EIF2DP41214 584 aaKnown RBP12.09□□□□□ -0.47
ATXN3-201ENST00000340660 GPR17Q13304 367 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 PRR16Q569H4 304 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 TRMT11Q7Z4G4 463 aaKnown RBP12.09□□□□□ -0.47
ATXN3-201ENST00000340660 BTLAQ7Z6A9 289 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 HTR3CQ8WXA8 447 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 GJA10Q969M2 543 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 PRR11Q96HE9 360 aaPredicted RBP12.09□□□□□ -0.47
ATXN3-201ENST00000340660 ADNPQ9H2P0 1102 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
ATXN3-201ENST00000340660 SATB2Q9UPW6 733 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 SDK2Q58EX2 2172 aa12.09□□□□□ -0.47
ATXN3-201ENST00000340660 PMS2P1A4D2B8 440 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 RTN2O75298 545 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 CSO75390 466 aaKnown RBP12.08□□□□□ -0.48
ATXN3-201ENST00000340660 LARGE1O95461 756 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 PRKCGP05129 697 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 ITGAVP06756 1048 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 C8BP07358 591 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 ACP1P24666 158 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 NTSR1P30989 418 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 CYP4F2P78329 520 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 C3orf38Q5JPI3 329 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
ATXN3-201ENST00000340660 GIPC2Q8TF65 315 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 CYP2S1Q96SQ9 504 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 ACOX2Q99424 681 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 GDAQ9Y2T3 454 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 RAD54BQ9Y620 910 aa12.08□□□□□ -0.48
ATXN3-201ENST00000340660 OBSL1O75147 1896 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 TADA3O75528 432 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 KRT7P08729 469 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 CALM1P0DP23 149 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 CALM2P0DP24 149 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 CALM3P0DP25 149 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 RBMS1P29558 406 aaKnown RBP12.07□□□□□ -0.48
ATXN3-201ENST00000340660 ADH7P40394 386 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 DUSP3P51452 185 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-201ENST00000340660 E2F1Q01094 437 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 RESTQ13127 1097 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-201ENST00000340660 CAPSQ13938 189 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 MORC3Q14149 939 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 EMC2Q15006 297 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 ZC2HC1CQ53FD0 456 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-201ENST00000340660 WWC2Q6AWC2 1192 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 APPL2Q8NEU8 664 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 SH3RF2Q8TEC5 729 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 SNX19Q92543 992 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 DEPDC7Q96QD5 511 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 CNNM2Q9H8M5 875 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 NUB1Q9Y5A7 615 aa12.07□□□□□ -0.48
ATXN3-201ENST00000340660 RP1L1Q8IWN7 2480 aaPredicted RBP12.06□□□□□ -0.48
ATXN3-201ENST00000340660 K7ELQ4 463 aaPredicted RBP12.06□□□□□ -0.48
ATXN3-201ENST00000340660 M0R082 166 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 IFIT3O14879 490 aaKnown RBP12.06□□□□□ -0.48
ATXN3-201ENST00000340660 MSH4O15457 936 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 NOBOXO60393 691 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 DFNA5O60443 496 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 OAZ2O95190 189 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 DDAH2O95865 285 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 ALBP02768 609 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 FURINP09958 794 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 HMGA1P17096 107 aaKnown RBP12.06□□□□□ -0.48
ATXN3-201ENST00000340660 ABCB4P21439 1286 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 KCNAB2Q13303 367 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 VEPH1Q14D04 833 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms